Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b8tA_

Fold library idPDB HeaderMoleculeTitle
c4b8tA_PDB header: protein/rnaChain: A: PDB Molecule: kh-type splicing regulatory protein;PDBTitle: rna binding protein solution structure of the third kh2 domain of ksrp in complex with the g-rich target sequence.


Added to library: Sat Nov 10 13:27:55 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAMAYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHA
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


TTTT


SSTTS
TTST

S


SSSS
 .........80.........90.........100......
Sequence ARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQG
Predicted secondary structure

























SS confidence



































Known secondary structure (DSSP) TTSS
S

SSSSSS




SSTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D