Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b8cL_

Fold library idPDB HeaderMoleculeTitle
c4b8cL_PDB header: hydrolase/cell cycleChain: L: PDB Molecule: glucose-repressible alcohol dehydrogenase transcriptionalPDBTitle: nuclease module of the yeast ccr4-not complex


Added to library: Wed Jan 9 21:34:37 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNASNPLLHPHLDDPSLLNNPIWKLQLHLAAVSAQSLGQPNIYARQNAMKKYLCTKQALMEMADTLTDSK
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)

SS
TTT
SS

TTSTTTSTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence TAKDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAE
Predicted secondary structure



























































SS confidence





































































Known secondary structure (DSSP) TT








B

SS

S


GGGGG

S
S

B

SS





GGGGGGTT



SS

SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) SGGGTT
S

SS





SSTTS
TT


TTS


S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D