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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b8bA_

Fold library idPDB HeaderMoleculeTitle
c4b8bA_PDB header: transcriptionChain: A: PDB Molecule: general negative regulator of transcription subunit 1;PDBTitle: n-terminal domain of the yeast not1


Added to library: Wed Jan 9 19:39:56 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LEGESLNDLLALLLSEILSATNRGNVIARSISSLQANQINWNRVFNLMSTKYFLLMPTTASLSCLFAALH
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Known secondary structure (DSSP)

GGGT


TS
GGGS
S







 .........80.........90.........100.........110.........120.........130.........140
Sequence DGPVIDEFFSCDWKVIFKLDLAIQLHKWSVQNGCFDLLNAEGTRKVSETIPNTKQSLLYLLSIASLNLEL
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Known secondary structure (DSSP) SS


T

TTTT


GGG
TT

BS
SSS


S

GGGB
 .........150.........160.........170.........180.........190.........200.........210
Sequence FLQREELSDGPMLAYFQECFFEDFNYAPEYLILALVKEMKRFVLLIENRTVIDEILITLLIQVHNKSPSS
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Known secondary structure (DSSP) TTTTS



T

S
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FKDVISTITDDSKIVDAAKIIINSDDAPIANFLKSLLDTGRLDTVINKLPFNEAFKILPCARQIGWEGFD
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Known secondary structure (DSSP)


S
S

STT
S
TTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence TFLKTKVSPSNVDVVLESLEVQTKMTDTPFRSLKTFDLFAFHSLIEVLNKCPLDVLQLQRFESLEFSLLI
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Known secondary structure (DSSP)

TTT




S
TTTS

TS


 .........360.........370.........380.........390.........400.........410.........420
Sequence AFPRLINFGFGHDEAILANGDIAGINNDIEKEMQNYLQKMYSGELAIKDVIELLRRLRDSDLPRDQEVFT
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Known secondary structure (DSSP)
GGGTTTTSS
TT
SSS


TTSS
T

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence CITHAVIAESTFFQDYPLDALATTSVLFGSMILFQLLRGFVLDVAFRIIMRFAKEPPESKMFKFAVQAIY
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Known secondary structure (DSSP) GGGGGGS
TTSS
TS
TTS
 .........500.........510.........520........
Sequence AFRIRLAEYPQYCKDLLRDVPALKSQAQVYQSIVEAAT
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Known secondary structure (DSSP) TGGGGGG

GGGGG
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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