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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b87A_

Fold library idPDB HeaderMoleculeTitle
c4b87A_PDB header: hydrolaseChain: A: PDB Molecule: dna cross-link repair 1a protein;PDBTitle: crystal structure of human dna cross-link repair 1a


Added to library: Wed Jan 9 16:53:55 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHV
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GGGB
TTSSS

SSSS
TT






TT
STT

S

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence QEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHML
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Known secondary structure (DSSP)
GGG

BTS
TT
SSSTT

TTS


S



GGGGGSGGGTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence YLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKY
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TT
STT





TTSSS

TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence KTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGADVIPQTKGNIS
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Known secondary structure (DSSP) TT

TTS
GGG
SGGG
SSGGG









TT
 .........290.........300.........310.........320.........330.....
Sequence IYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY
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Known secondary structure (DSSP)


SS



S
SS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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