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  | Protein Homology/analogY Recognition Engine V 2.0 |
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Fold library id | PDB Header | Molecule | Title |
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c4b6vA_ | PDB header: translation | Chain: A: PDB Molecule: eukaryotic translation initiation factor 4e type 3; | PDBTitle: the third member of the eif4e family represses gene expression via a2 novel mode of recognition of the methyl-7 guanosine cap moiety |
Added to library: Sat Mar 2 08:28:11 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | A | L | P | P | A | A | A | P | P | G | A | N | E | P | L | D | K | A | L | S | A | L | P | P | E | P | G | G | V | P | L | H | S | P | W | T | F | W | L | D | R | S | L | P | G | A | T | A | A | E | C | A | S | N | L | K | K | I | Y | T | V | Q | T | V | Q | I | F | W | S |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | T | T | T | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | V | Y | N | N | I | P | P | V | T | S | L | P | L | R | C | S | Y | H | L | M | R | G | E | R | R | P | L | W | E | E | E | S | N | A | K | G | G | V | W | K | M | K | V | P | K | D | S | T | S | T | V | W | K | E | L | L | L | A | T | I | G | E | Q | F | T | D | C | A | A | A |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | G | G | G | S | S | S | S | S | S | S | G | G | G | T | T | S | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Sequence | D | D | E | I | I | G | V | S | V | S | V | R | D | R | E | D | V | V | Q | V | W | N | V | N | A | S | L | V | G | E | A | T | V | L | E | K | I | H | Q | L | L | P | H | I | A | F | K | A | V | F | Y | K | P | H | E | E | H | H | A | F | E | G | G | R | G | K | H | |||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | S | S | T | T | S | T | T | T | T | S | S | S | S | S | S | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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