Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4b6at_

Fold library idPDB HeaderMoleculeTitle
c4b6at_PDB header: ribosomeChain: T: PDB Molecule: 60s ribosomal protein l21-a;PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1


Added to library: Sat Nov 3 15:34:50 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)

SSSS



TT


BTTTSSTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NERGIAIPTTIDIDQISGGWCPEIDDVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQP
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

TT




TTS


B

TT
TT



TTTSTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGPLLGGKADAVAAAHIAMETVVALLSSGITGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFLAGQNEGI
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TS
B

STT
BTTT

TT
BTTBSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VAEFTNVSAIPSDDFVVQSGEVYLIDLKMASLEHKAGELIARPGAYVRDFAQTHILKLKTSRQLLTKIDK
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) SS

TTS


B

TT
SS




S




TT




SST
 .........290.........300.........310.........320.........330.........340.........350
Sequence QGVYPFKLSHLLKSFRLGMSEISNNYLCVESPIQIARTSTLVARECNTIVLCDSSVSTTDRPELLRLTGG
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
SSSGGG

TTS



TT

TT
SGG
 .........360.........370.........380
Sequence SKTCQPSWIHSQHELNPQDSIVQGIFQLAT
Predicted secondary structure

















SS confidence





























Known secondary structure (DSSP) GG


GGGB

S



SSSGGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D