PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4b6aR_

Fold library id	PDB Header	Molecule	Title
c4b6aR_	PDB header: ribosome	Chain: R: PDB Molecule: 60s ribosomal protein l19-b;	PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1

Links to external resources
Added to library: Wed Jan 9 15:08:37 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A N L R T Q K R L A A S V V G V G K R K V W L D P N E T S E I A Q A N S R N A I R K L V K N G T I V K K A V T V H S K S R T R A H A Q S K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G
T T
T
S T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E G R H S G Y G K R K G T R E A R L P S Q V V W I R R L R V L R R L L A K Y R D A G K I D K H L Y H V L Y K E S K G N A F K H K R A L V E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S G G G
S
S
T T S S
T T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . .

Sequence I I Q A K A D A Q R E K A L N E E A E A R R L K N R A A R D R R A Q R V A E K R D A L L K E D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	N	L	R	T	Q	K	R	L	A	A	S	V	V	G	V	G	K	R	K	V	W	L	D	P	N	E	T	S	E	I	A	Q	A	N	S	R	N	A	I	R	K	L	V	K	N	G	T	I	V	K	K	A	V	T	V	H	S	K	S	R	T	R	A	H	A	Q	S	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T												T	S		G	G	G					T	T							T			S											T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	G	R	H	S	G	Y	G	K	R	K	G	T	R	E	A	R	L	P	S	Q	V	V	W	I	R	R	L	R	V	L	R	R	L	L	A	K	Y	R	D	A	G	K	I	D	K	H	L	Y	H	V	L	Y	K	E	S	K	G	N	A	F	K	H	K	R	A	L	V	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S		S	G	G	G			S						S																							T	T	S	S													T	T	T			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Sequence	I	I	Q	A	K	A	D	A	Q	R	E	K	A	L	N	E	E	A	E	A	R	R	L	K	N	R	A	A	R	D	R	R	A	Q	R	V	A	E	K	R	D	A	L	L	K	E	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										T	T	T	T	T	T