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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b6aC_

Fold library idPDB HeaderMoleculeTitle
c4b6aC_PDB header: ribosomeChain: C: PDB Molecule: 60s ribosomal protein l4-a;PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1


Added to library: Thu Jan 10 01:51:12 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAV
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Known secondary structure (DSSP)





BTTB


S



SGGGS


TTTT






TTTT
SS



SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHR
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Known secondary structure (DSSP)

S


SSSTTTT
B
SSTTSTTS

SS


TTS






TT
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAE
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Known secondary structure (DSSP)
SS
S
SS
TTGGG


TTTT

SSSGGGTT






SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHII
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Known secondary structure (DSSP)
SSTTSTT
TTS

SGGG
S




SSS

SSTT





SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence STSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAEKTGTKP
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Known secondary structure (DSSP) S
S
TTSS




SS





S


TTS
S
SST

SS









 .........360.
Sequence AAVFTETLKHD
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SS confidence










Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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