PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4b4aA_

Fold library id	PDB Header	Molecule	Title
c4b4aA_	PDB header: transport protein	Chain: A: PDB Molecule: sec-independent protein translocase protein tatc;	PDBTitle: structure of the tatc core of the twin arginine protein2 translocation system

Links to external resources
Added to library: Wed Jan 9 20:05:26 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E H L R E L R Y R L I I S I I A F L I G S G I A F Y F A K Y V F E I L K E P I L K S Y P E V E L I T L S P T E P L F I L I K I S L A V G F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I A S P V I L Y Q F W R F I E P A L Y S H E K R A F I P L L L G S I L L F X L G A L F A Y F I V L P L A L K F L L G L G F T Q L L A T P Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T T T T T T T
S S S T T S S S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S V D X Y I S F V L K L V V A F G I A F E X P I V L Y V L Q K A G V I T P E Q L A S F R K Y F I V I A F V I G A I I A P D V S T Q V L X A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T S S
S S

. . . . . . . . . 220 . . . . .

Sequence P L L L L Y E I S I F L G K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	H	L	R	E	L	R	Y	R	L	I	I	S	I	I	A	F	L	I	G	S	G	I	A	F	Y	F	A	K	Y	V	F	E	I	L	K	E	P	I	L	K	S	Y	P	E	V	E	L	I	T	L	S	P	T	E	P	L	F	I	L	I	K	I	S	L	A	V	G	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T																	T	T	S						S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	S	P	V	I	L	Y	Q	F	W	R	F	I	E	P	A	L	Y	S	H	E	K	R	A	F	I	P	L	L	L	G	S	I	L	L	F	X	L	G	A	L	F	A	Y	F	I	V	L	P	L	A	L	K	F	L	L	G	L	G	F	T	Q	L	L	A	T	P	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	S				T	T	T	T																					T								T	T	T		S	S	S	T	T	S	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	D	X	Y	I	S	F	V	L	K	L	V	V	A	F	G	I	A	F	E	X	P	I	V	L	Y	V	L	Q	K	A	G	V	I	T	P	E	Q	L	A	S	F	R	K	Y	F	I	V	I	A	F	V	I	G	A	I	I	A	P	D	V	S	T	Q	V	L	X	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	S											T	T	S	S																									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	P	L	L	L	L	Y	E	I	S	I	F	L	G	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T