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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b3nA_

Fold library idPDB HeaderMoleculeTitle
c4b3nA_PDB header: sugar binding protein/ligaseChain: A: PDB Molecule: maltose-binding periplasmic protein, tripartitePDBTitle: crystal structure of rhesus trim5alpha pry/spry domain


Added to library: Sat Oct 27 16:04:33 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSG
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Known secondary structure (DSSP)


SSS





TTT
S
SGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGK
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Known secondary structure (DSSP)
B





B
TTT


TTT
SS

SBTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE
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Known secondary structure (DSSP)


SSSTT
TTSSSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGIDAASPNKELAKEFLENYL
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Known secondary structure (DSSP) TT

GGGT




TT


BTT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR
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Known secondary structure (DSSP) SSS

SSBTTSS


STTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QTVDEALKDAQTRITRRVFRLDMFRELTDARRYWVDVTLATNNISHAVIAEDKRQVSSRNPYCTGVLGSQ
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Known secondary structure (DSSP) S
T





S
TTB





S

S

TTSS







SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SITSGKHYWEVDVSKKSAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPF
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Known secondary structure (DSSP)
BSSS
TT
S




TTTSST



GGGTTTT


SS

S
 .........500.........510.........520.........530.........540.........550.......
Sequence APFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCSFSKPVFPYLNPRKCTVPMTLC
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Known secondary structure (DSSP) S



SS

STTTTTTTTT
S



S
B
TT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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