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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b03A_

Fold library idPDB HeaderMoleculeTitle
c4b03A_PDB header: virusChain: A: PDB Molecule: dengue virus 1 e protein;PDBTitle: 6a electron cryomicroscopy structure of immature2 dengue virus serotype 1


Added to library: Sat Jun 8 09:32:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRCVGISNRDFVEGLSATGWVDVVLEHGSCVTTMAKDKPTLDIELLKTEVTNPAILRKLCIEAKISNTTT
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Known secondary structure (DSSP)

STTTT


S

SS
SSS

TTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSRCPTQGEATLVEEQDTNFVCRRTFVDRGWGNGCGLFGKGSLITCAKFKCVTKLEGKIVQYENLKYSVI
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Known secondary structure (DSSP)

TTS




SGGG
SS


TTTSSSS
S


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VTVHTGDQHQVGNETTEHGTTATITPQAPTSEIQLTDYGALTLDCSPRTGLDFNEMVLLTMKEKSWLVHK
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Known secondary structure (DSSP)


S

SSSSS
SSS


SS



SSS

S



S

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QWFLDLPLPWTSGASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFA
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Known secondary structure (DSSP) S
S
TT
SS



TTGGGG
STT




TSSS

TTTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence GHLKCRLKMDKLTLKGVSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSSQDEKGVIQNGR
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Known secondary structure (DSSP)

TT


STTS



BS

TTS


BSSSB





TT




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LITANPIVTDKEKPVNIEAEPPFGESYIVVGAGEKALKLSWFKKGSSIGKMFEATARGARRMAILGDTAW
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Known secondary structure (DSSP)
SS
S
B
STT




SS

SSS



S



ST
STT
S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence DFGSIGGVFTSVGKLVHQIFGTAYGVLFSGVSWTMKIGIGILLTWLGLNSRSTSLSMTCIAVGMVTLYLG
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Known secondary structure (DSSP) S
SSS




SSSSS
T
S
SS
TT
 .....
Sequence VMVQA
Predicted secondary structure




SS confidence




Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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