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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4aygB_

Fold library idPDB HeaderMoleculeTitle
c4aygB_PDB header: transferaseChain: B: PDB Molecule: glucansucrase;PDBTitle: lactobacillus reuteri n-terminally truncated glucansucrase2 gtf180 in orthorhombic apo-form


Added to library: Sat Jul 6 08:30:56 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence INGQQYYIDPTTGQPRKNFLLQNGNDWIYFDKDTGAGTNALKLQFDKGTISADEQYRRGNEAYSYDDKSI
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Known secondary structure (DSSP)






B
TTTSSB
SSTT
TTT

S



SS





SSTSBS
SSTTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence ENVNGYLTADTWYRPKQILKDGTTWTDSKETDMRPILMVWWPNTVTQAYYLNYMKQYGNLLPASLPSFST
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Known secondary structure (DSSP)

BTTB
BTT

BSTTT

TT

GGGT

SSTT

S
TT




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DADSAELNHYSELVQQNIEKRISETGSTDWLRTLMHEFVTKNSMWNKDSENVDYGGLQLQGGFLKYVNSD
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Known secondary structure (DSSP) T

T
STTSGGGSGGGTT


STT
TTS



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LTKYANSDWRLMNRTATNIDGKNYGGAEFLLANDIDNSNPVVQAEELNWLYYLMNFGTITGNNPEANFDG
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Known secondary structure (DSSP) TSGGG

S



S

TT
TTSSS

S
S

SS
TTSTS
TTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence IRVDAVDNVDVDLLSIARDYFNAAYNMEQSDASANKHINILEDWGWDDPAYVNKIGNPQLTMDDRLRNAI
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Known secondary structure (DSSP) TTGGGS
T
TTS
TS





TTTT
SSB
 .........360.........370.........380.........390.........400.........410.........420
Sequence MDTLSGAPDKNQALNKLITQSLVNRANDNTENAVIPSYNFVRAHDSNAQDQIRQAIQAATGKPYGEFNLD
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Known secondary structure (DSSP) TSS
TTT


TTSSSS

S

SS
S

S
BTTBTT


TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence DEKKGMEAYINDQNSTNKKWNLYNMPSAYTILLTNKDSVPRVYYGDLYQDGGQYMEHKTRYFDTITNLLK
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Known secondary structure (DSSP) TSSS
SSS
S

SS
B
SSBSTT
SB
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TRVKYVAGGQTMSVDKNGILTNVRFGKGAMNATDTGTDETRTEGIGVVISNNTNLKLNDGESVVLHMGAA
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Known secondary structure (DSSP)

S

TTS


TT

STT



GGGTT



TT



TT



GG
 .........570.........580.........590.........600.........610.........620.........630
Sequence HKNQKYRAVILTTEDGVKNYTNDTDAPVAYTDANGDLHFTNTNLDGQQYTAVRGYANPDVTGYLAVWVPA
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Known secondary structure (DSSP) GTT

SSS
SSSTT



TTS
SS
GGG
TT
S


SSS
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence GAADDQDARTAPSDEAHTTKTAYRSNAALDSNVIYEGFSNFIYWPTTESERTNVRIAQNADLFKSWGITT
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Known secondary structure (DSSP) T

TT








S

SSS
S


ST




TTB


SSGGG
TTT

 .........710.........720.........730.........740.........750.........760.........770
Sequence FELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPDQIY
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Known secondary structure (DSSP)



S
B



SSGGGTTT
SSSBS
TT
SSSSS
BTTB
TT


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence NLPGKEAVTVTRSDDHGTTWEVSPIKNVVYITNTIGGGEYQKKYGGEFLDTLQKEYPQLFSQVYPVTQTT
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Known secondary structure (DSSP)



TT

B
TT
S
SSB
TTTT
GGGGT


TTTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence IDPSVKIKEWSAKYFNGTNILHRGAGYVLRSNDGKYYNLGTSTQQFLPSQLSVQDNEGYGFVKEGNNYHY
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Known secondary structure (DSSP)

TTS

SSB
GGG

SS
TT
B
B
STT
B
B
SSSS

B

TTTSSS

TTSTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence YDENKQMVKDAFIQDSVGNWYYLDKNGNMVANQSPVEISSSGTYLFLNNGTSFRSGLVKTDAGTYYYDGD
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Known secondary structure (DSSP)
TTS
B

S
TTS

TTS
B


SS




B
TTS
B

S
SS

TT
 .........990.........1000.........1010.........1020.......
Sequence GRMVRNQTVSDGAMTYVLDENGKLVSESFDSSATEAHPLKPGDLNGQ
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Known secondary structure (DSSP) S
B

STT
TTS

GGGGS




TTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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