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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4awdB_

Fold library idPDB HeaderMoleculeTitle
c4awdB_PDB header: hydrolaseChain: B: PDB Molecule: beta-porphyranase;PDBTitle: crystal structure of the beta-porphyranase bpgh16b (bacple_01689)2 from the human gut bacterium bacteroides plebeius


Added to library: Sat Jul 28 13:34:23 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYSLAEEHIKNLPEAPEGYKWVVNEDYTDEFNGKRLNAAKWHAKSPYWTNGRPPATFKAENVSVKKGCLR
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Known secondary structure (DSSP)

GGGGS



TT
GGG
B


SSS

TTTSS
SS

S
STT
GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLTTMSSTFWLSNRPVMKEIMKIKT
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Known secondary structure (DSSP)

GGG
B
SS
S


B
S

SSSS







 .........150.........160.........170.........180.........190.........200.........210
Sequence WSSQELDIIETMGIIRSVNPDNPWNKTWNMQMNSNTHYWYQEQGGKRTDNTAKRSDVVSYMTDPSAEDFH
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Known secondary structure (DSSP)
S




BTTB
TTTTGGGB
SSS




S



B


TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TYGCWWVDANTVKFYYDGKYMYTIKPTTKYTDTPFDRPMFIHIVTETYDWEKQVPTAEDLKDKDKSTTYY
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Known secondary structure (DSSP) TTTT



SS
S
TT
S
B



TT





TTGGG
TTTT
 .........290..
Sequence DWVRAYKLVPIE
Predicted secondary structure




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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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