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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4apmA_

Fold library idPDB HeaderMoleculeTitle
c4apmA_PDB header: membrane proteinChain: A: PDB Molecule: apical membrane antigen 1;PDBTitle: crystal structure of ama1 from babesia divergens


Added to library: Wed Jan 9 14:32:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STPKDIWGRYMAKFDLAKSHGSGIYVDLGGTERVGATQHRMPTGKCPVMGKVINLGNNADFLNRISAENP
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Known secondary structure (DSSP)

GGG
T
S
SSB


TT


SS
TTT


TTSBTT
SSG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QDRGLAFPDTILSPVSAADLVRWGYDGNDVANCAEYAGNIIPASDTATKYRYPFVYDAKEEMCHILFTPM
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Known secondary structure (DSSP) GG

SB





SSTT

S
T


TT
TT





TTTTBS


 .........150.........160.........170.........180.........190.........200.........210
Sequence QYNRTSSLLCMEPMKSGIDAHLYYGSSRVDKKWEENCPMYPVKDAIFGRGANGSCVAIESAFEEFTRDAE
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Known secondary structure (DSSP)

B



TTS
STTTT
TT

TTS

S
TT


S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ECSALMFENAAADLESAKNSKGVGMNWANYDSNTGLCRVIEETPNCLIIDAGSFAMTAVGSPLEQDAVPF
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Known secondary structure (DSSP) TTS
BS


TT

TT
S

TTT

S


SSS
S
GGG
B

 .........290.........300.........310.........320.........330.........
Sequence PCDIVTNGYIEPRPRSRHIFEVTTALSREALKCSKYVHEKYSESCGTYYYCSEEKPSSW
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Known secondary structure (DSSP)
TTS


SS










SSTTT


SSTTTSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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