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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c4ap4A_ | PDB header: ligase/signalling protein | Chain: A: PDB Molecule: e3 ubiquitin ligase rnf4; | PDBTitle: rnf4 - ubch5a - ubiquitin heterotrimeric complex |
| Added to library: Sat Jul 28 13:49:49 2012 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | S | G | T | V | S | C | P | I | C | M | D | G | Y | S | E | I | V | Q | N | G | R | L | I | V | S | T | E | C | G | H | V | F | C | S | Q | C | L | R | D | S | L | K | N | A | N | T | C | P | T | C | R | K | K | I | N | H | K | R | Y | H | P | I | Y | I | G | S | G | T | V | S |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | B | T | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | B | T | T | T | B | T | T | T | ![]() | ![]() | ![]() | B | S | S | S | S | B |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
| Sequence | C | P | I | C | M | D | G | Y | S | E | I | V | Q | N | G | R | L | I | V | S | T | E | C | G | H | V | F | C | S | Q | C | L | R | D | S | L | K | N | A | N | T | C | P | T | C | R | K | K | I | N | H | K | R | Y | H | P | I | Y | I | |||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T | T | B | G | G | G | ![]() | ![]() | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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