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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4am3A_

Fold library idPDB HeaderMoleculeTitle
c4am3A_PDB header: transferase/rnaChain: A: PDB Molecule: polyribonucleotide nucleotidyltransferase;PDBTitle: crystal structure of c. crescentus pnpase bound to rna


Added to library: Wed Jan 9 19:53:32 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSMFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLTVNYQEKTF
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Known secondary structure (DSSP)





B



TT
SSS
TTSSTT
SS

TT

S


GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDILGMVAASAAL
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Known secondary structure (DSSP) GGT



SSS
S

S

GGGB
TT

S


SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CLSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVAGTADAVMMVESEIQELSEEIVLGGVNFA
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Known secondary structure (DSSP) T
SB



TTS

TT
S
SS
SSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence HQQMQAVIDAIIDLAEHAAKEPFAFEPEDTDAIKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIA
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Known secondary structure (DSSP) T











S


SS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALGLSDENPTGYDPLKLGAIFKELEADVVRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRG
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Known secondary structure (DSSP) S


SS

SS

SSS

TTS

SS




SSTTSST
 .........360.........370.........380.........390.........400.........410.........420
Sequence ETQAIVVATLGTGDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPMLP
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Known secondary structure (DSSP) T
GGGSTT


GGGGT





S

GGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TKEDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQDGFAVLSDILGDED
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Known secondary structure (DSSP)
TTT



SS
T


SS


SS
S

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence HLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAMDAPRADVGDFAPKIE
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Known secondary structure (DSSP)
STT
SS


TTT
SS

SS

TT

 .........570.........580.........590.........600.........610.........620..
Sequence TINIPTDKIREVIGSGGKVIREIVATTGAKVDINDDGVVKVSASDGAKIKAAIDWIKSITDE
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Known secondary structure (DSSP)

GGG
GGG


SSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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