PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4akrC_

Fold library id	PDB Header	Molecule	Title
c4akrC_	PDB header: actin-binding protein	Chain: C: PDB Molecule: f-actin-capping protein subunit alpha;	PDBTitle: crystal structure of the cytoplasmic actin capping protein2 cap32_34 from dictyostelium discoideum

Links to external resources
Added to library: Sat Jul 7 13:16:59 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A S N Q E L V Q I A T N F L L N A P P C E F M E V V S D V R A L L P S E S L L N A S A G S T F R E Y N T S Q M V S V Q T S K G S A L I T K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
S
G G G G T T T T
T T
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G E I S N N E Y L D P K N K Q V I T Y D H I K Q E V T G E R S A S G E I E Q D I E Q Y R A A F D E E A T K Y C N E Y Y P N G V S A V Y G T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T G G G T T T T T
S S
S
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V S E G I K I T V C I S T C I Y K P N A F Y S G R W R S V W T C T F K P G S G N V T S N G K V Q V N V H Y F E D G N V Q L N T V T Q K Q T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G T
T T S S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 .

Sequence S P S A D A Q S T A V N A F K A I G K A E L N L H T A L D N N Y S T M G D T T F K A L R R A L P I N R T K I N W Q K V K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T T T S
S S
T T S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	N	Q	E	L	V	Q	I	A	T	N	F	L	L	N	A	P	P	C	E	F	M	E	V	V	S	D	V	R	A	L	L	P	S	E	S	L	L	N	A	S	A	G	S	T	F	R	E	Y	N	T	S	Q	M	V	S	V	Q	T	S	K	G	S	A	L	I	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T			T	T														S		G	G	G	G	T	T	T													T						T	T							S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	I	S	N	N	E	Y	L	D	P	K	N	K	Q	V	I	T	Y	D	H	I	K	Q	E	V	T	G	E	R	S	A	S	G	E	I	E	Q	D	I	E	Q	Y	R	A	A	F	D	E	E	A	T	K	Y	C	N	E	Y	Y	P	N	G	V	S	A	V	Y	G	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				T	T					G	G	G	T							T	T	T	T									S	S		S		G	G	G																				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	E	G	I	K	I	T	V	C	I	S	T	C	I	Y	K	P	N	A	F	Y	S	G	R	W	R	S	V	W	T	C	T	F	K	P	G	S	G	N	V	T	S	N	G	K	V	Q	V	N	V	H	Y	F	E	D	G	N	V	Q	L	N	T	V	T	Q	K	Q	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															G	G	G	T															T	T	S	S																S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Sequence	S	P	S	A	D	A	Q	S	T	A	V	N	A	F	K	A	I	G	K	A	E	L	N	L	H	T	A	L	D	N	N	Y	S	T	M	G	D	T	T	F	K	A	L	R	R	A	L	P	I	N	R	T	K	I	N	W	Q	K	V	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																																	T	T	T	T	T	T	S		S	S		T	T	S	S								T