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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ak2A_

Fold library idPDB HeaderMoleculeTitle
c4ak2A_PDB header: heparin-binding proteinChain: A: PDB Molecule: bt_4661;PDBTitle: structure of bt4661, a suse-like surface located2 polysaccharide binding protein from the bacteroides3 thetaiotaomicron heparin utilisation locus


Added to library: Sat Mar 9 08:34:30 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ANPNYFTYFRYGNNLGLTPIENYADQFRIEAGGKLNSVKPVPTATDAKDGLSSLKWEVELKHNPNNTKAT
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Known secondary structure (DSSP)

TT





BSS

SSGGGS


TT

GGG







TT
GGGS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence INESTGQITITGLKQGQCGMVMVTATAGEGKTAVSVKQPVFFHFSMISDSNVQLEYTPFVFQVNPARGGE
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Known secondary structure (DSSP)
TTT

S

TTBSSGGG




GGG


B
SSS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SIAPSLGAGIDKSTFRLDYRRDFFYYNIAGPDSHISGALAQKVDNFLSEMWNSYDATAGTSRKPMSYFEN
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Known secondary structure (DSSP)



B

TT

GGG
SSS
TTS



TT

S
TT
TTSSGGG
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TTNLSKALGYIDQTDFKVHINPNLWRNKDGYANGAMIGQITYDVTGKDPQAATSGARVSPIFIWFDTKFL
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Known secondary structure (DSSP) TT
GGGSS
TTT


TT
STT

SSSS

TT

GGGB


TT

 ......
Sequence EHHHHH
Predicted secondary structure


SS confidence





Known secondary structure (DSSP)


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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