Fold library entry viewer: c4aipB_

Added to library: Fri Feb 1 17:40:15 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	D	R	Q	G	S	K	I	R	T	N	I	V	T	L	Q	Q	K	D	E	S	T	A	T	D	M	R	E	L	L	K	E	E	P	S	I	D	F	G	G	G	N	G	T	S	Q	F	L	T	L	R	G	M	G	Q	N	S	V	D	I	K	V	D	N	A	Y	S	D	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T	S												T	T					S					T	T	T		T	T					S	S	S	G	G	G						T	T			T	T	T						T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	Y	H	Q	G	R	F	I	V	D	P	A	L	V	K	V	V	S	V	Q	K	G	A	G	S	A	S	A	G	I	G	A	T	N	G	A	I	I	A	K	T	V	D	A	Q	D	L	L	K	G	L	D	K	N	W	G	V	R	L	N	S	G	F	A	S	N	N	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	S							G	G	G									S	S			G	G	G		T	T	T	T	S															T	T		S	S	S											T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	Y	G	A	S	V	F	G	K	E	G	N	F	D	G	L	F	S	Y	N	R	N	D	E	K	D	Y	E	A	G	K	G	F	R	N	V	N	G	G	K	T	V	P	Y	S	A	L	D	K	R	S	Y	L	A	K	I	G	T	T	F	G	D	D	D	H	R	I	V	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																B	B	S	T	T				S	S	S		S	B		T	T																	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	M	K	D	Q	H	R	G	I	R	T	V	R	E	E	F	T	V	G	D	K	S	S	R	I	N	I	D	R	Q	A	P	A	Y	R	E	T	T	Q	S	N	T	N	L	A	Y	T	G	K	N	L	G	F	V	E	K	L	D	A	N	A	Y	V	L	E	K	E	R	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	T	T	S					T	T	S	T	T	S																										S	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	D	D	S	G	T	G	Y	A	G	N	V	K	G	P	N	H	T	R	I	T	T	R	G	A	N	F	N	F	D	S	R	L	A	E	Q	T	L	L	K	Y	G	I	N	Y	R	H	Q	E	I	K	P	Q	A	F	L	N	S	K	F	S	E	Q	Q	M	K	D	R	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T		G	G	G	T				S																					T	T																	S	S			G	G	G					T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	D	T	V	H	A	Y	K	L	S	N	P	T	K	T	D	T	G	V	Y	I	E	A	I	H	D	I	G	D	F	T	L	T	G	G	L	R	Y	D	R	F	K	V	K	T	H	D	G	K	T	V	S	S	S	N	L	N	P	S	F	G	V	I	W	Q	P	H	E	H	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T	T																	T	T	S																				T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	F	S	A	S	H	N	Y	A	S	R	S	P	R	L	Y	D	A	L	Q	T	H	G	K	R	G	I	I	S	I	A	D	G	T	K	A	E	R	A	R	N	T	E	I	G	F	N	Y	N	D	G	T	F	A	A	N	G	S	Y	F	W	Q	T	I	K	D	A	L	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		G	G	G	T	T		T	T							T	T																		S	S																		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	Q	N	R	S	V	A	V	R	E	A	V	N	A	G	Y	I	K	N	H	G	Y	E	L	G	A	S	Y	R	T	G	G	L	T	A	K	V	G	V	S	H	S	K	P	R	F	Y	D	T	H	K	D	K	L	L	S	A	N	P	E	F	G	A	Q	V	G	R	T	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S																								T	T																		S	T	T							T	T	T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	S	L	A	Y	R	F	Q	N	P	N	L	E	I	G	W	R	G	R	Y	V	Q	K	A	T	G	S	I	L	A	A	G	Q	K	D	R	K	G	N	L	E	N	V	V	R	K	G	F	G	V	N	D	V	F	A	N	W	K	P	L	G	K	D	T	L	N	V	N	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T																	S	B	T	T					S	S																						T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Sequence	V	N	N	V	F	N	K	F	Y	Y	P	H	S	Q	R	W	T	N	T	L	P	G	V	G	R	D	V	R	L	G	V	N	Y	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T							S	S	S		S	S	S					B

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PDB structure

FASTA sequence

Hidden Markov model

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