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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ainB_

Fold library idPDB HeaderMoleculeTitle
c4ainB_PDB header: membrane proteinChain: B: PDB Molecule: glycine betaine transporter betp;PDBTitle: crystal structure of betp with asymmetric protomers.


Added to library: Sat Jun 9 12:02:50 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASLNWSVIVPALVIVLATVVWGIGFKDSFTNFASSALSAVVDNLGWAFILFGTVFVFFIVVIAASKFGTI
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Known secondary structure (DSSP)



SSGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLGREFRTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIV
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Known secondary structure (DSSP)
S






SSTTT

TTS
SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLAIAYSTFRVGRKQLLSSAFVPLIGEKGAEGWLGKLIDILAIIATVFGTACSLGLGALQIGAGLSAANI
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Known secondary structure (DSSP) TT


S
GGGGG
TTGGGSTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IEDPSDWTIVGIVSVLTLAFIFSAISGVGKGIQYLSNANMVLAALLAIFVFVVGPTVSILNLLPGSIGNY
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Known secondary structure (DSSP)




TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSNFFQMAGRTAMSADGTAGEWLGSWTIFYWAWWISWSPFVGMFLARISRGRSIREFILGVLLVPAGVST
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Known secondary structure (DSSP) T

TTSGGGTTTTTT
SS

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence VWFSIFGGTAIVFEQNGESIWGDGAAEEQLFGLLHALPGGQIMGIIAMILLGTFFITSADSASTVMGTMS
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Known secondary structure (DSSP) TTT



TTT
STTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QHGQLEANKWVTAAWGVATAAIGLTLLLSGGDNALSNLQNVTIVAATPFLFVVIGLMFALVKDLSNDVIY
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Known secondary structure (DSSP) TTT
TT

TT
STTT
 .......
Sequence LEYREQQ
Predicted secondary structure

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Known secondary structure (DSSP) TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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