Fold library entry viewer: c4aimA_

Added to library: Wed Jan 9 18:57:39 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	P	M	F	D	I	K	R	K	T	I	E	W	G	G	K	T	L	V	L	E	T	G	R	I	A	R	Q	A	D	G	A	V	L	A	T	M	G	E	T	V	V	L	A	T	A	V	F	A	K	S	Q	K	P	G	Q	D	F	F	P	L	T	V	N	Y	Q	E	K	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B							T	T								S	S	S			S	S	S								T	T											S	S			T	T			S											G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	G	K	I	P	G	G	F	F	K	R	E	G	R	P	S	E	K	E	T	L	V	S	R	L	I	D	R	P	I	R	P	L	F	V	K	G	F	K	N	E	V	Q	V	V	V	T	V	L	Q	H	D	L	E	N	D	P	D	I	L	G	M	V	A	A	S	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T					S	T	T	S	S			S																	G	G	G	B		T	T																S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	L	S	G	A	P	F	M	G	P	I	G	A	A	R	V	G	W	V	D	G	A	Y	V	L	N	P	T	L	D	E	M	K	E	S	K	M	D	L	V	V	A	G	T	A	D	A	V	M	M	V	E	S	E	I	Q	E	L	S	E	E	I	V	L	G	G	V	N	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S	B		S											T	T					S								T		S									S	S	S									S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	Q	Q	M	Q	A	V	I	D	A	I	I	D	L	A	E	H	A	A	K	E	P	F	A	F	E	P	E	D	T	D	A	I	K	A	K	M	K	D	L	V	G	A	D	I	A	A	A	Y	K	I	Q	K	K	Q	D	R	Y	E	A	V	G	A	A	K	K	K	A	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																								T	T	T	T	T	T	T	T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	G	L	S	D	E	N	P	T	G	Y	D	P	L	K	L	G	A	I	F	K	E	L	E	A	D	V	V	R	R	G	I	L	D	T	G	L	R	I	D	G	R	D	V	K	T	V	R	P	I	L	G	E	V	G	I	L	P	R	T	H	G	S	A	L	F	T	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S		S	S		S		S			T	T	T																			S	S	S			T	T	S			T	T									B		S	S	S	S	S	S								T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	T	Q	A	I	V	V	A	T	L	G	T	G	D	D	E	Q	F	I	D	A	L	E	G	T	Y	K	E	S	F	L	L	H	Y	N	F	P	P	Y	S	V	G	E	T	G	R	M	G	S	P	G	R	R	E	I	G	H	G	K	L	A	W	R	A	L	R	P	M	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	T	T	S						S	S															G	G	G	G	T						S	S														T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	K	E	D	F	P	Y	T	I	R	L	V	S	E	I	T	E	S	N	G	S	S	S	M	A	T	V	C	G	S	S	L	A	M	M	D	A	G	V	P	L	V	R	P	V	S	G	I	A	M	G	L	I	L	E	Q	D	G	F	A	V	L	S	D	I	L	G	D	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T												S			S	S																		T				S	S													S	S						B	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	L	G	D	M	D	F	K	V	A	G	T	S	E	G	L	T	S	L	Q	M	D	I	K	I	A	G	I	T	P	A	I	M	E	Q	A	L	A	Q	A	K	E	G	R	A	H	I	L	G	E	M	N	K	A	M	D	A	P	R	A	D	V	G	D	F	A	P	K	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S									T	T											S	S																											T	T		S	S			S	S			S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	I	N	I	P	T	D	K	I	R	E	V	I	G	S	G	G	K	V	I	R	E	I	V	A	T	T	G	A	K	V	D	I	N	D	D	G	V	V	K	V	S	A	S	D	G	A	K	I	K	A	A	I	D	W	I	K	S	I	T	D	E	A	E	I	G	K	I	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G							G	G	G																		S	S	S							S																					S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Sequence	G	K	V	V	K	V	V	D	F	G	A	F	V	N	F	F	G	A	K	D	G	L	V	H	V	S	Q	I	S	N	E	R	V	A	K	P	S	D	V	L	K	E	G	Q	M	V	K	V	K	L	L	G	F	D	D	R	G	K	T	K	L	S	M	K	V	V	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T						S	S	S	S							S	S	S	S	S	S	S			T	T	T		S	S			T	T												T	T	T								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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