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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4aidC_

Fold library idPDB HeaderMoleculeTitle
c4aidC_PDB header: transferase/peptideChain: C: PDB Molecule: polyribonucleotide nucleotidyltransferase;PDBTitle: crystal structure of c. crescentus pnpase bound to rnase e2 recognition peptide


Added to library: Sat Apr 21 12:26:28 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPMFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLTVNYQEKTF
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Known secondary structure (DSSP)







TTSSS
TTSSTT
SS

SS

S


GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDILGMVAASAAL
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Known secondary structure (DSSP) GGT



STTSS

S

GGGB
TT

S


SSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence CLSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVAGTADAVMMVESEIQELSEEIVLGGVNFA
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Known secondary structure (DSSP) T
SB
S

TTS

TTTGGG
S
SSSSSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence HQQMQAVIDAIIDLAEHAAKEPFAFEPEDTDAIKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIA
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Known secondary structure (DSSP) T










TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AIFKELEADVVRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGTGDDEQF
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Known secondary structure (DSSP)
STT

TTS

TT




SSTTSSTT
GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPMLPTKEDFPYTIRLVSEITES
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Known secondary structure (DSSP) TT


GGGTT




SS

GGGS

TTT



 .........430.........440.........450.........460.........470.........480.........490
Sequence NGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQDGFAVLSDILGDEDHLGDMDFKVAGTSEGLTS
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Known secondary structure (DSSP) SS
TT


SS


SS
S

TGGGGG
S
SSS
 .........500.........510.........520.........530.........
Sequence LQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAMDAPRADVGDFAP
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Known secondary structure (DSSP)
SS


TSS

SS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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