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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4aibC_

Fold library idPDB HeaderMoleculeTitle
c4aibC_PDB header: lyaseChain: C: PDB Molecule: ornithine decarboxylase;PDBTitle: crystal structure of ornithine decarboxylase from entamoeba2 histolytica.


Added to library: Mon Feb 4 12:08:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLEVKEFALNLISQFEPENQPLGFWIFDTEGVEKAVERWKKNMPTVRPCFAVKCNPEPHLVKLLGELGCG
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Known secondary structure (DSSP)
TT

TTT

S

TTTTT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FDCASLNEIKEVLDLGFNPEDITYSQTFKPYNQLIEASHLGINHTIVDSIDEVQKIAKYAPKMGIMIRIM
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Known secondary structure (DSSP) SSTT

TTS

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T


S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DEVEIVLKEIKDKGLNLDGVHFHVSEVFTKALTKARNTVTLAEQFGMKPYLIDIGGGFSAPFEEFAATIE
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Known secondary structure (DSSP)
TT




TTT











T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KTIKELEFPERTRFIAEPGRYMASNAFHLVSSLHGKRVRIQNGKKQIEYTSGKSCECITQKVNENTKMYE
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Known secondary structure (DSSP) T

TT


SGGG

TT




B
TTS


S
S

 .........290.........300.........310.........320...
Sequence SIIYGDKVATQELPEMEPGKDWLLFPNMGAYTIHVIYTLPLKS
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Known secondary structure (DSSP)







TTT
SS

SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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