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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ag5D_

Fold library idPDB HeaderMoleculeTitle
c4ag5D_PDB header: hydrolaseChain: D: PDB Molecule: type iv secretory pathway virb4 components-like protein;PDBTitle: structure of virb4 of thermoanaerobacter pseudethanolicus


Added to library: Wed Jan 9 20:08:49 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WKRGGDRTNSNWTILAKAGKSFTAKMLLLREYMQGIIIDPEREYKEMCRKLGGVWINNPLQVFQSPLALH
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Known secondary structure (DSSP)


STT








TT

TT
SSTT


B

TT




 .........80.........90.........100.........110.........120.........130.........140
Sequence IQTLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYCVKKAEENPET
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Known secondary structure (DSSP)
TT

TT

TT

GGGS
TTTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence YGRLSVLLKRAAEGADSYLWAGPTVFDVHDLQNAEDQVKRAQYFNVLSFAWNILERDRRERTVLVVDEAW
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Known secondary structure (DSSP) TSTTSS



GGGTTS
S

SS
TGG
 .........220.........230.........240.........250.........260.........270
Sequence MLVDPQTPQAIAFLRDTSKRIRKYNGSLIVISQIDFLAPEVQRYGQALLDLLLAQLEAIT
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Known secondary structure (DSSP) GG

TT
TTT


TTTSTTT


B



TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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