Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ag4A_

Fold library idPDB HeaderMoleculeTitle
c4ag4A_PDB header: immune system/transferaseChain: A: PDB Molecule: epithelial discoidin domain-containing receptor 1;PDBTitle: crystal structure of a ddr1-fab complex


Added to library: Sat Apr 21 12:31:54 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KCRYALGMQDRTIPDSDISASSSWSDSTAARHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVAL
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)



STTTS
S
GGGS

SSGGG
GGG
BTT

TTTSSB

SS


SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence VGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPR
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
B
GGGT

B

SSSSS



TTS




SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence ADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLD
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)
SSS



B

S




SSS

S
TT

STTS


GGGSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGP
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) STTS
SSSS

TTTT
GGG
TTS


GGGTB


S
SS
 .........290.........300.........310.........320.........330.........340
Sequence AMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISDAA
Predicted secondary structure




















SS confidence



























































Known secondary structure (DSSP) SSS
SSS

SS

S

S

SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D