Fold library entry viewer: c4aefB_

Added to library: Sat Nov 3 16:31:14 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Y	K	L	V	S	F	R	D	S	E	I	F	G	R	V	A	E	V	E	F	S	L	I	R	E	G	S	Y	A	Y	L	L	G	D	F	N	A	F	N	E	G	S	F	R	M	E	Q	E	G	K	N	W	K	I	K	I	A	L	P	E	G	V	W	H	Y	A	F	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T														S	S							T	T	T	T	T		T	T	S	S						S	S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	K	F	V	L	D	P	D	N	P	E	R	R	V	Y	T	R	K	G	Y	K	F	H	R	E	V	N	V	A	R	I	V	K	S	D	D	L	V	F	H	T	P	S	L	L	Y	L	Y	E	I	F	G	R	V	H	V	L	L	R	T	Q	K	G	V	I	K	G	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T										G	G	G	T													T	T		S					S	S	T	T	T					T	T										T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	L	G	E	K	H	V	P	M	R	K	K	A	S	D	E	L	F	D	Y	F	E	V	I	V	E	G	G	D	K	R	L	N	Y	S	F	E	V	L	T	M	E	G	A	K	F	E	Y	G	Q	F	K	A	R	P	F	S	I	E	F	P	T	W	V	I	D	R	V	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S											S	S											S		S											T	T	S													B						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	I	M	P	D	K	F	A	R	S	R	K	I	Q	W	G	G	D	L	I	G	I	K	E	K	I	D	H	L	V	N	L	G	I	N	A	I	Y	L	T	P	I	F	S	S	L	T	Y	H	G	Y	D	I	V	D	Y	F	H	V	A	R	R	L	G	G	D	R	A	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S													T								T													S	S	T	T			S									G	G	G	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	L	L	S	E	L	K	R	F	D	I	K	V	I	L	D	G	V	F	H	H	T	S	F	F	H	P	Y	F	Q	D	V	V	R	K	G	E	N	S	S	F	K	N	F	Y	R	I	I	K	F	P	V	V	S	K	E	F	L	Q	I	L	H	S	K	S	S	W	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T										S	B			T	T	S										S	T	T		T	T	G	G	G	B		B	S	S	T	T		S		T	T	T					T	T	S		G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	K	K	I	K	S	L	G	W	N	Y	E	S	F	F	S	V	W	I	M	P	R	L	N	H	D	N	P	K	V	R	E	F	I	K	N	V	I	L	F	W	T	N	K	G	V	D	G	F	R	M	D	V	A	H	G	V	P	P	E	V	W	K	E	V	R	E	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	B		B	S	T	T		T	T	S	B	B	B		T	T	S																		T							T	T	G	G	G	S												S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	E	K	Y	L	I	G	E	V	M	D	D	A	R	L	W	L	F	D	K	F	H	G	V	M	N	Y	R	L	Y	D	A	I	L	R	F	F	G	Y	E	E	I	T	A	E	E	F	L	N	E	L	E	L	L	S	S	Y	Y	G	P	A	E	Y	L	M	Y	N	F	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									S			G	G	G	T	T	T	T		S			B												T	T	S			S																	G	G	G	G	G	G		B			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	H	D	V	E	R	F	L	D	I	V	G	D	K	R	K	Y	V	C	A	L	V	F	L	M	T	Y	K	G	I	P	S	L	F	Y	G	D	E	I	G	L	R	G	I	N	L	Q	G	M	E	S	S	R	A	P	M	L	W	N	E	E	E	W	D	Q	R	I	L	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																							S	S	S	B					T	T	G	G	G	T							T	T				S								G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	K	T	L	V	K	I	R	K	N	N	K	A	L	L	F	G	N	F	V	P	V	K	F	K	R	K	F	M	V	Y	K	R	E	H	M	G	E	R	T	I	V	A	I	N	Y	S	N	S	R	V	K	E	L	G	I	T	I	P	E	Y	S	G	V	I	I	N	E	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																T	T									T	T										S	S	S					T	T					T	T							T	T
	.	.	.	.	.	.
Sequence	V	K	L	I	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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