Fold library entry viewer: c4aayE_

Added to library: Wed Jan 9 23:49:33 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	K	R	H	I	D	R	L	P	I	I	P	A	D	A	K	K	H	N	V	T	C	H	F	C	I	V	G	C	G	Y	H	A	Y	T	W	P	I	N	K	Q	G	G	T	D	P	Q	N	N	I	F	G	V	D	L	S	E	Q	Q	Q	A	E	S	D	A	W	Y	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T									S	S	B	T	T											T	T					S	S	G	G	G	S	T	T		S		T	T	S				T	T		S	S				G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	M	Y	N	V	V	K	Q	D	G	R	D	V	H	V	V	I	K	P	D	H	E	C	V	V	N	S	G	L	G	S	V	R	G	A	R	M	A	E	T	S	F	S	E	A	R	N	T	Q	Q	Q	R	L	T	D	P	L	V	W	R	Y	G	Q	M	Q	P	T	S	W	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G							T	T											T	T		T	T	T	T	T				T	T	G	G	G	T	T	T	T	S		B	T	T	T	T	B		T	T	S			S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	A	L	D	L	V	A	R	V	T	A	K	I	V	K	E	K	G	E	D	A	L	I	V	S	A	F	D	H	G	G	A	G	G	G	Y	E	N	T	W	G	T	G	K	L	Y	F	E	A	M	K	V	K	N	I	R	I	H	N	R	P	A	Y	N	S	E	V	H	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G										S	T	T															T	T					S				T	T	B	S	S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	D	M	G	V	G	E	L	N	N	C	Y	E	D	A	E	L	A	D	T	I	V	A	V	G	T	N	A	L	E	T	Q	T	N	Y	F	L	N	H	W	I	P	N	L	R	G	E	S	L	G	K	K	K	E	L	M	P	E	E	P	H	E	A	G	R	I	I	I	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S			S		T							S						S							S							T							T	T	T								S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	R	R	T	V	T	V	N	A	C	E	Q	T	A	G	A	D	N	V	L	H	L	A	I	N	S	G	T	D	L	A	L	F	N	A	L	F	T	Y	I	A	D	K	G	W	V	D	R	D	F	I	D	K	S	T	L	R	E	G	T	A	R	P	P	L	Y	P	A	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														G	G	G								T	T																	T		S									B			S						T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	S	E	A	N	P	G	H	L	S	S	F	E	D	A	V	E	G	C	R	M	S	I	E	E	A	A	E	I	T	G	L	D	A	A	Q	I	I	K	A	A	E	W	I	G	M	P	K	E	G	G	K	R	R	R	V	M	F	G	Y	E	K	G	L	I	W	G	N	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B	T	T	B		S																																									B	T	T	T	B														T	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	R	T	N	G	A	L	V	N	L	A	L	A	T	G	N	I	G	R	P	G	G	G	V	V	R	L	G	G	H	Q	E	G	Y	V	R	P	S	D	A	H	V	G	R	P	A	A	Y	V	D	Q	L	L	I	G	G	Q	G	G	V	H	H	I	W	G	C	D	H	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		S	S	S	T	T								S	B		B					S			G	G	G		S	S										T	T			S						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	T	L	N	A	H	E	F	K	R	V	Y	K	K	R	T	D	M	V	K	D	A	M	S	A	A	P	Y	G	D	R	E	A	M	V	N	A	I	V	D	A	I	N	Q	G	G	L	F	A	V	N	V	D	I	I	P	T	K	I	G	E	A	C	H	V	I	L	P	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T																					T	S		S	S	S														T	T									S	S			S	G	G	G	G		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	S	G	E	M	N	L	T	S	M	N	G	E	R	R	M	R	L	T	E	R	Y	M	D	P	P	G	Q	S	M	P	D	C	L	I	A	A	R	L	A	N	T	M	E	R	V	L	T	E	M	G	D	V	G	Y	A	A	Q	F	K	G	F	D	W	Q	T	E	E	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	B							T	T										S			S	T	T																							T							T	T		S				S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	M	D	G	Y	N	K	N	A	H	G	G	E	F	V	T	Y	E	R	L	S	A	M	G	T	N	G	F	Q	E	P	A	T	G	F	T	D	G	K	I	E	G	T	Q	R	L	Y	T	D	G	V	F	S	T	D	D	G	K	A	R	F	M	D	A	P	W	R	G	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T					S	T	T	G	G	G										G	G	G				S	S						T	T						S	S	S		T	T	S			S	S	T	T	S		B									S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	P	G	K	Q	Q	Q	K	D	S	H	K	Y	L	I	N	N	G	R	A	N	V	V	W	Q	S	A	Y	L	D	Q	E	N	D	F	V	M	D	R	F	P	Y	P	F	I	E	M	N	P	E	D	M	A	E	A	G	L	K	E	G	D	L	V	E	I	Y	N	D	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T								S	S									S	S			T	T		T	T	G	G	G									S	S													T	T			T	T								S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	T	Q	A	M	A	Y	P	T	P	T	A	R	R	G	E	T	F	M	L	F	G	F	P	T	G	V	Q	G	N	V	T	S	A	G	T	N	E	L	I	I	P	N	Y	K	Q	T	W	G	N	I	R	K	I	S	D	A	P	R	N	V	A	H	L	S	F	K	S	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		T	T							S	B	T	T	B		G	G	G	G	S		S		B		T	T			B			S	S										S			G	G	G	T	T				S			S
	.	.	.
Sequence	Y	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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