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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4a9aB_

Fold library idPDB HeaderMoleculeTitle
c4a9aB_PDB header: translationChain: B: PDB Molecule: ribosome-interacting gtpase 1;PDBTitle: structure of rbg1 in complex with tma46 dfrp domain


Added to library: Sat Oct 6 12:54:32 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STTVEKIKAIEDEMARTQKNKATSFHLGQLKAKLAKLRRELLTSASSGSGGGAGIGFDVARTGVASVGFV
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Known secondary structure (DSSP)



STTTTTTSSSTTSS
S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GFPSVGKSTLLSKLTGTESETTLVTVPGVIRYKGAKIQMLDLPGIIDGGKQVIAVARTCNLLFIILDVNK
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Known secondary structure (DSSP)

TTSSSS




S



TT
GGGS



STTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PLHHKQIIEKELEGVGIRLNKTPPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRC
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Known secondary structure (DSSP)
TTT





SSS
SS

SS

TT

S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DATVDDLIDVLEASSRRYMPAIYVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLNLV
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Known secondary structure (DSSP)


TTTT


GGGS
TTSTT
BTTTTBT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RIYTKPKGQIPDFTDPVVLRSDRCSVKDFCNQIHKSLVDDFRNALVYGSSVKHQPQYVGLSHILEDEDVV
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Known secondary structure (DSSP)

SSS


SSS
TTB
B
TT

STT
SSSS
TT
B

TT
 .....
Sequence TILKK
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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