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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4a69A_

Fold library idPDB HeaderMoleculeTitle
c4a69A_PDB header: transcriptionChain: A: PDB Molecule: histone deacetylase 3,;PDBTitle: structure of hdac3 bound to corepressor and inositol tetraphosphate


Added to library: Sat Jan 14 21:31:49 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQ
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Known secondary structure (DSSP)




TTTT




TT
S

TTTGGGGS





TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEA
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Known secondary structure (DSSP)

TTTGGGGT
SSSS


TTTTS
STT


TT
BTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGA
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Known secondary structure (DSSP) BTTBSS
TTT
S

SSS

TTT
SS
STT
TT



TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence ESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVE
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Known secondary structure (DSSP) GGGTTS
TT
B

S

GGGBTT
SS


BB
 .........290.........300.........310.........320.........330.........340.........350
Sequence YVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNS
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Known secondary structure (DSSP) TT







STT



SB



TTGGGGTTT
BSS





S




 .........360.........
Sequence RQYLDQIRQTIFENLKMLN
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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