Fold library entry viewer: c4a4zA_

Added to library: Sat Dec 24 22:33:46 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	E	W	A	H	V	V	D	L	N	H	K	I	E	N	F	D	E	L	I	P	N	P	A	R	S	W	P	F	E	L	D	T	F	Q	K	E	A	V	Y	H	L	E	Q	G	D	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T				T	T						S	S		S				S	S															T	T									T	T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	R	N	M	T	K	T	I	Y	T	S	P	I	K	A	L	S	N	Q	K	F	R	D	F	K	E	T	F	V	N	I	G	L	I	T	G	D	V	Q	I	N	P	D	A	N	C	L	I	M	T	T	E	I	L	R	S	M	L	Y	R	G	A	D	L	I	R	D	V	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S		G	G	G										T	T									S	S					T	T	S	S																T		S	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	I	F	D	E	V	H	Y	V	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M	L	P	Q	H	V	K	F	I	L	L	S	A	T	V	P	N	T	Y	E	F	A	N	W	I	G	R	T	K	Q	K	N	I	Y	V	I	S	T	P	K	R	P	V	P	L	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				T	T		T	T										S		T	T											T	T													T									S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	I	W	A	K	K	E	L	I	P	V	I	N	Q	N	S	E	F	L	E	A	N	F	R	K	H	K	E	I	L	N	D	G	P	S	K	K	T	W	P	E	I	V	N	Y	L	R	K	R	E	L	L	P	M	V	V	F	V	F	S	K	K	R	C	E	E	Y	A	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								T	T			B																		T	T												T	T			S						S											T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	E	G	I	N	F	C	N	N	K	E	K	S	Q	I	H	M	F	I	E	K	S	I	T	R	L	K	K	E	D	R	D	L	P	Q	I	L	K	T	R	S	L	L	E	R	G	I	A	V	H	H	G	G	L	L	P	I	V	K	E	L	I	E	I	L	F	S	K	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																					T	T	S						T												T	T	T						T	T	S														T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	K	V	L	F	A	T	E	T	F	A	M	G	L	N	L	P	T	R	T	V	I	F	S	S	I	R	K	H	D	G	N	G	L	R	E	L	T	P	G	E	F	T	Q	M	A	G	R	A	G	R	R	G	L	D	S	T	G	T	V	I	V	M	A	Y	N	S	P	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						T					S						S					S		S					T	T															G	G	G			T	T	T		S	S									S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	A	T	F	K	E	V	T	M	G	V	P	T	R	L	Q	S	Q	F	R	L	T	Y	N	M	I	L	N	L	L	R	I	E	A	L	R	V	E	E	M	I	K	Y	S	F	S	E	N	A	K	E	T	L	Q	P	E	H	E	K	Q	I	K	V	L	Q	E	E	L	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																								T	T								T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	F	L	E	L	M	L	A	Y	K	E	A	T	V	N	L	M	Q	E	M	V	K	S	P	S	I	L	H	I	L	K	E	G	R	L	V	A	F	R	D	P	N	D	C	L	K	L	G	F	V	F	K	V	S	L	K	D	A	V	C	V	I	M	T	T	K	P	Y	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	S	T	T					T		T	T								T	T													T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	P	K	A	D	G	Y	R	R	R	N	F	P	K	F	Q	K	T	D	F	Y	M	E	E	V	P	V	T	I	E	V	I	T	K	R	K	F	A	P	L	G	K	V	I	K	K	D	V	A	A	L	N	E	F	N	A	E	T	N	N	I	L	D	G	K	T	L	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																																											T																		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	L	K	I	H	Q	I	L	L	D	R	T	N	I	R	D	E	S	Q	H	I	V	P	K	F	K	A	H	V	I	K	K	K	I	E	E	L	Y	H	L	M	S	D	S	L	L	P	D	Y	E	K	R	L	A	V	L	K	D	T	E	F	I	D	Q	N	H	N	V	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S																				T	T	T																	T	T	S	B		T	T			B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	G	R	V	A	C	E	I	N	S	G	Y	E	L	V	L	T	E	L	I	L	D	N	F	L	G	S	F	E	P	E	E	I	V	A	L	L	S	V	F	V	Y	E	G	K	T	R	E	E	E	P	P	I	V	T	P	R	L	A	K	G	K	Q	R	I	E	E	I	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			S	S											S	S	G	G	G	G											G	G	G	S						S	S						S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	M	L	C	V	F	N	T	H	Q	I	P	L	T	Q	D	E	A	E	F	L	D	R	K	R	F	A	M	M	N	V	V	Y	E	W	A	R	G	L	S	F	K	E	I	M	E	M	S	P	E	A	E	G	T	V	V	R	V	I	T	W	L	D	E	I	C	R	E	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T										G	G	G	S		T	T	T	T										T									T		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
Sequence	T	A	S	I	I	I	G	N	S	T	L	H	M	K	M	S	R	A	Q	E	L	I	K	R	D	I	V	F	A	A	S	L	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																S		G	G	G	G				T	T

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PDB structure

FASTA sequence

Hidden Markov model

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