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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4a1eO_

Fold library idPDB HeaderMoleculeTitle
c4a1eO_PDB header: ribosomeChain: O: PDB Molecule: rpl19;PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1


Added to library: Thu Jan 10 07:57:20 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSRSRARAFLEAKR
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Known secondary structure (DSSP)


TS
GGG
SSS

STS







 .........80.........90.........100.........110.........120.........130.........140
Sequence KGRHTGSGKRKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQYHEFYLGSKGNLYKNKTVLIEA
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Known secondary structure (DSSP) TSS
SSTT

S
S
TTSS
TT

SS
 .........150.........160.........170.........180....
Sequence IHVSKADKIKSDKLTSQQEARRAKNTASRAKRNEKAQIVAKVDV
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Known secondary structure (DSSP) S
TT

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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