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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4a1cA_

Fold library idPDB HeaderMoleculeTitle
c4a1cA_PDB header: ribosomeChain: A: PDB Molecule: rpl8;PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.


Added to library: Sat Dec 3 17:37:06 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRVIRAQRKGRANGVYKSHKSGRIAPAQYRVYDFAERQGYIRGCIRDIVHEPGRGAPLAEVAFRDPYRYK
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Known secondary structure (DSSP)



TT
SSSS




TT










S

TT
SS

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TNKEHFIAAEGQYSGQYVYCGLKAQIAVGNVLPINRIPEGTVVCNVEEKVGDRGTFSRASGCYATIIGHS
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Known secondary structure (DSSP)
BTT

TT
SS



TT
GGGS
TT
SB
SSTT
S

B

STT


 .........150.........160.........170.........180.........190.........200.........210
Sequence EDGDKTRIRLPSGARKTIPGSCRATVGIVAGGGRTDKPILKAGNQFHKYARKRKSWPRVRGVAMNPVDHP
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Known secondary structure (DSSP) SSSS
TTS
TT
S
BSSTTGGGS



TSS


S


TTTS
TTT
S
 .........220.........230.........240.........250.......
Sequence HGGGNHQHIGHPATVSKWASAGQKVGLRAARRTGLVRGGQKEKMAMK
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Known secondary structure (DSSP) S

SSS



S
S
TT

GGG

SS
S

S


S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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