Fold library entry viewer: c4a0rB_

Added to library: Sat Jun 16 13:23:30 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	L	P	L	N	H	P	T	Y	L	I	W	S	A	N	T	S	L	G	K	T	L	V	S	T	G	I	A	A	S	F	L	L	Q	Q	P	S	S	S	A	T	K	L	L	Y	L	K	P	I	Q	T	G	F	P	S	D	S	D	S	R	F	V	F	S	K	L	D	S	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S								S	S	T	T	S	S														T		S	S			S	S												S	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	R	Q	I	P	I	S	I	S	N	S	V	L	H	S	S	L	P	A	A	K	S	L	G	M	C	S	L	N	F	R	D	E	K	T	V	T	G	A	P	E	L	L	C	K	T	L	Y	A	W	E	A	A	I	S	P	H	L	A	A	E	R	E	N	A	T	V	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T																																		T	T													S	S	S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	V	L	Q	M	I	E	K	C	L	K	E	E	M	D	L	L	C	L	V	E	T	A	G	G	V	A	S	P	G	P	S	G	T	L	Q	C	D	L	Y	R	P	F	R	L	P	G	I	L	V	G	D	G	R	L	G	G	I	S	G	T	I	A	A	Y	E	S	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T											S	S	T	T		B		T	T	S		B					T	G	G	G											S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	R	G	Y	D	I	A	A	V	V	F	E	D	H	G	L	V	N	E	V	P	L	T	S	Y	L	R	N	K	V	P	V	L	V	L	P	P	V	P	K	D	P	S	D	D	L	I	E	W	F	V	E	S	D	G	V	F	K	A	L	K	E	T	M	V	L	A	N	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T												S	S		T								T	T	T	S	S										S		T	T			S							T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	L	E	R	L	N	G	M	A	K	L	A	G	E	V	F	W	W	P	F	T	Q	H	K	L	V	H	Q	E	T	V	T	V	I	D	S	R	C	G	E	N	F	S	I	Y	K	A	S	D	N	S	S	L	S	Q	Q	F	D	A	C	A	S	W	W	T	Q	G	P	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T			G	G	G			G	G	G									T	T							S	T	T	T	S								T	T					T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	F	Q	A	E	L	A	R	E	M	G	Y	T	A	A	R	F	G	H	V	M	F	P	E	N	V	Y	E	P	A	L	K	C	A	E	L	L	L	D	G	V	G	K	G	W	A	S	R	V	Y	F	S	D	N	G	S	T	A	I	E	I	A	L	K	M	A	F	R	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S				T	T																T	T	T	T	T	T								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	C	V	D	H	N	F	I	V	V	K	V	I	A	L	R	G	S	Y	H	G	D	T	L	G	A	M	E	A	Q	A	P	S	P	Y	T	G	F	L	Q	Q	P	W	Y	T	G	R	G	L	F	L	D	P	P	T	V	F	L	S	N	G	S	W	N	I	S	L	P	E	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										T	T					S	S						T	S			B	T	T	B	S	T	T	T		T	T																	T	T								T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	T	F	T	S	R	D	E	I	F	D	K	S	R	D	A	S	T	L	A	R	I	Y	S	A	Y	L	S	K	H	L	Q	A	H	V	G	A	L	I	I	E	P	V	I	H	G	A	G	G	M	H	M	V	D	P	L	F	Q	R	V	L	V	N	E	C	R	N	R	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	G	G	G	T		G	G	G	G	S	S														T											S	S			S	T	T	T	S																		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	V	I	F	D	E	V	F	T	G	F	W	R	L	G	V	E	T	T	T	E	L	L	G	C	K	P	D	I	A	C	F	A	K	L	L	T	G	G	M	V	P	L	A	V	T	L	A	T	D	A	V	F	D	S	F	S	G	D	S	K	L	K	A	L	L	H	G	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	T	T	T	T	S	B	S		T					S				S						G	G	G	G	T	T	S	S														T	T		S	S		S	S	S	S						T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	S	A	H	A	M	G	C	A	T	A	A	K	A	I	Q	W	F	K	D	P	E	T	N	H	N	I	T	S	Q	G	K	T	L	R	E	L	W	D	E	E	L	V	Q	Q	I	S	S	H	S	A	V	Q	R	V	V	V	I	G	T	L	F	A	L	E	L	K	A	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																		T	T	T		T	T	B		T	T	S	S	B	B				S										T	S	S	S								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
Sequence	A	K	S	L	L	I	M	L	R	E	D	G	I	F	T	R	P	L	G	N	V	I	Y	L	M	C	G	P	C	T	S	P	E	I	C	R	R	L	L	T	K	L	Y	K	R	L	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T						B	T	T								T	T																		T

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PDB structure

FASTA sequence

Hidden Markov model

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