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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zyjB_

Fold library idPDB HeaderMoleculeTitle
c3zyjB_PDB header: cell adhesionChain: B: PDB Molecule: netrin-g1;PDBTitle: netring1 in complex with ngl1


Added to library: Wed Jan 9 19:43:20 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YDLCKTQIYTEEGKVWDYMACQPESTDMTKYLKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPEL
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Known secondary structure (DSSP)


S


SS


B





GGGT
SGGGBS
SS



SS
TT




SSSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AHPPELMFDFESTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQ
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Known secondary structure (DSSP)


GGGGGS




B



S
SS



S
SS


SSSTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNMASL
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Known secondary structure (DSSP) SSTS




GGG

SS
SS



TTT
SSSTTTT
S
SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence YGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKL
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Known secondary structure (DSSP)
S


SSSS

SS
GGG





SSS
S
TT
 .........290.........300.........310.........320......
Sequence TCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSIS
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Known secondary structure (DSSP)


TTSSSS

TT

SS




B

SSSS
B









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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