Fold library entry viewer: c3zuqA_

Added to library: Sat Dec 10 18:03:10 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	V	T	I	N	N	F	N	Y	N	D	P	I	D	N	N	N	I	I	M	M	E	P	P	F	A	R	G	T	G	R	Y	Y	K	A	F	K	I	T	D	R	I	W	I	I	P	E	R	Y	T	F	G	Y	K	P	E	D	F	N	K	S	S	G	I	F	N	R	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S				S	S	S							G	G	G	T	T	S	S										T	T						S				T	T			G	G	G	G	S			S			S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	E	Y	Y	D	P	D	Y	L	N	T	N	D	K	K	N	I	F	L	Q	T	M	I	K	L	F	N	R	I	K	S	K	P	L	G	E	K	L	L	E	M	I	I	N	G	I	P	Y	L	G	D	R	R	V	P	L	E	E	F	N	T	N	I	A	S	V	T	V	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		T	T	T	T		S																			T	T	S																	S			S	S	S		T	T						S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	S	N	P	G	E	V	E	R	K	K	G	I	F	A	N	L	I	I	F	G	P	G	P	V	L	N	E	N	E	T	I	D	I	G	I	Q	N	H	F	A	S	R	E	G	F	G	G	I	M	Q	M	K	F	C	P	E	Y	V	S	V	F	N	N	V	Q	E	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T			S							S								S	B	T	T										T	T			G	G	G	T	T	S										S	S									S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	A	S	I	F	N	R	R	G	Y	F	S	D	P	A	L	I	L	M	H	E	L	I	H	V	L	H	G	L	Y	G	I	K	V	D	D	L	P	I	V	P	N	E	K	K	F	F	M	Q	S	T	D	A	I	Q	A	E	E	L	Y	T	F	G	G	Q	D	P	S	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		T	T	T	T	S																						T	T						S		B		B			S	S	T	T	B						B										T	T	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	P	S	T	D	K	S	I	Y	D	K	V	L	Q	N	F	R	G	I	V	D	R	L	N	K	V	L	V	C	I	S	D	P	N	I	N	I	N	I	Y	K	N	K	F	K	D	K	Y	K	F	V	E	D	S	E	G	K	Y	S	I	D	V	E	S	F	D	K	L	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														S	S		T	T	S														T					S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	L	M	F	G	F	T	E	T	N	I	A	E	N	Y	K	I	K	T	R	A	S	Y	F	S	D	S	L	P	P	V	K	I	K	N	L	L	D	N	E	I	Y	T	I	E	E	G	F	N	I	S	D	K	D	M	E	K	E	Y	R	G	Q	N	K	A	I	N	K	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S										T					S		T	T	S									S		S	S		T	T	T		B	T	T	T	B	T			G	G	G	T			G	G	G	T	T	T	B	T	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	E	E	I	S	K	E	H	L	A	V	Y	K	I	Q	M	C	V	D	L	V	L	Q	C	I	D	V	D	N	E	D	L	F	F	I	A	D	K	N	S	F	S	D	D	L	S	K	N	E	R	I	E	Y	N	T	Q	S	N	Y	I	E	N	D	F	P	I	N	E	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S												-									G	G	G	S	B			B		G	G	G	S			G	G	G	S						T	T								S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	D	T	D	L	I	S	K	I	E	L	P	S	E	N	T	E	S	L	T	D	F	N	V	D	V	P	V	Y	E	K	Q	P	A	I	K	K	I	F	T	D	E	N	T	I	F	Q	Y	L	Y	S	Q	T	F	P	L	D	I	R	D	I	S	L	T	S	S	F	D	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	S			S					S											B									S							S										T	T				T	T			S					S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	L	F	S	N	K	V	Y	S	F	F	S	M	D	Y	I	K	T	A	N	K	V	V	E	A	G	L	F	A	G	W	V	K	Q	I	V	N	D	F	V	I	E	A	N	K	S	N	T	D	I	S	L	I	V	P	Y	I	G	L	A	L	N	V	G	N	E	T	A	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T						S									T					G	G	G																	T			B				S		B		T	T								T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	F	E	N	A	F	E	I	A	G	A	S	I	L	L	E	F	I	P	E	L	L	I	P	V	V	G	A	F	L	L	E	S	Y	I	D	N	K	N	K	I	I	K	T	I	D	N	A	L	T	K	R	N	E	K	W	S	D	M	Y	G	L	I	V	A	Q	W	L	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G		S																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	N	T	Q	F	Y	T	I	K	E	G	M	Y	K	A	L	N	Y	Q	A	Q	A	L	E	E	I	I	K	Y	R	Y	N	I	Y	S	E	K	E	K	S	N	I	N	I	D	F	N	D	I	N	S	K	L	N	E	G	I	N	Q	A	I	D	N	I	N	N	F	I	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																																	S								S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	C	S	V	S	Y	L	M	K	K	M	I	P	L	A	V	E	K	L	L	D	F	D	N	T	L	K	K	N	L	L	N	Y	I	D	E	N	K	L	Y	L	I	G	S	A	E	Y	E	K	S	K	V	N	K	Y	L	K	T	I	M	P	F	D	L	S	I	Y	T	N	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																									T	T						T	T												T	T							G	G	G	T				S
	.	.	.	.	.	.	.	.	.	850
Sequence	I	L	I	E	M	F	N	K	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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