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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3zueB_

Fold library idPDB HeaderMoleculeTitle
c3zueB_PDB header: virusChain: B: PDB Molecule: capsid structural protein vp60;PDBTitle: rabbit hemorrhagic disease virus (rhdv)capsid protein


Added to library: Sat May 26 12:11:57 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDPGVVATTSVVTAENSSASIATAGIGGPPQQVDQQETWRTNFYYNDVFTWSVADAPGSILYTVQHSPQN
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Known secondary structure (DSSP)

S





SS



T
SSTT
STT
SS

TT

TT
S
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence NPFTAVLSQMYAGWAGGMQFRFIVAGSGVFGGRLVAAVIPPGIEIGPGLEVRQFPHVVIDARSLEPVTNT
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Known secondary structure (DSSP) SGGG
S




SS



TT



SSTS

SS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MPDLRPNMYHPTGDPGLVPTLVLSVYNNLINPFGGSTSAIQVTVETRPSEDFEFVMIRAPSSKTVDSISP
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Known secondary structure (DSSP)




SSSSTT

SSS




SS
SS


TT





TT


SS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFADIDHRRGSASYPGNNA
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Known secondary structure (DSSP) TTSS
SBSTT
B
SSSS
SSB
SSB

TTSS


SS


SSS

SS

SS

B


S




 .........290.........300.........310.........320.........330.........340.........350
Sequence TNVLQFWYANAGSAVDNPISQVAPDGFPDMSFVPFNGPGIPAAGWVGFGAIWNSNSGAPNVTTVQAYELG
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Known secondary structure (DSSP)



TTSSS




SSS
TTS
TT

S
B



SSS

SS











STT
SS
S







 .........360.........370.........380.........390.........400.........410.........420
Sequence FATGAPGNLQPTTNTSGAQTVAKSIYAVVTGTAQNPAGLFVMASGVISTPNANAITYTPQPDRIVTTPGT
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Known secondary structure (DSSP)




B


SS
TS



B
B

TT

SS


SS
SSBB




S






SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence PAAAPVGKNTPIMFASVVRRTGDVNATAGSASGTQYGTGSQPLPVTIGLSLNNYSSSLMPGQFFVWQLTF
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Known secondary structure (DSSP)

B

BTTB

SSSSS



B
SSSSB

TTTSS


S


SS
 .........500.........510.........520.........530.........540...
Sequence ASGFMEIGLSVDGYFYAGTGALTTLIDLTELIDVRPVGPRPSKSTLVFNLGGT
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Known secondary structure (DSSP) SS




SSS

SSS



TTTT
S

TTS


BSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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