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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3zs6A_

Fold library idPDB HeaderMoleculeTitle
c3zs6A_PDB header: peptide binding proteinChain: A: PDB Molecule: periplasmic oligopeptide-binding protein;PDBTitle: the structural characterization of burkholderia pseudomallei oppa.


Added to library: Sat Jul 7 13:56:47 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LADQQDLTRQVPAEVESLDPAHIESWTGNTIGLDLFEGLARIDASGAVVPGVAQAWEHKAPDTWIFKLRR
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Known secondary structure (DSSP)

S

SS

S
SSGGG

S


S
TTS
SSTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DAKWSNGQPVTAADFVYAWQRLADPKTGSKYTILVEFVKNASAIIAGKQPPGDLGIRAIDPYTIEVKTEV
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Known secondary structure (DSSP)

B
TTS
B


GGG

S
GGGGGGBTTTTSS
GGGSSTTBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PVSYFPELTAMAPLTPVNKDAVAKFGDAWTRPKNIVSNGPYTLVDWQPNNRIVMAKSDKYWNARNVVIRK
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Known secondary structure (DSSP)

TTTTSGGGS


GGGTTSTTT



SSTTT
SSSTTGGG



 .........220.........230.........240.........250.........260.........270.........280
Sequence VTYLPIENDETALRMYQAGQIDYTYSIPAGGFGQISKQFGKELRPGLQLATYYYYLKNSDPALKDKRVRE
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Known secondary structure (DSSP)


TTS
SB
S


TT
GGG


TTSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALAMVLDREILTSKITQAGEVPMYGLMPKGVKGVQRPFTPDWASWPMARRVDYAKNLLKQAGHGDANPLT
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Known secondary structure (DSSP)

TT
SS

SSS

TT
TTSSS



GGGGS
TT
STTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence FTLTYNTNDLHKKVALFAASEWRTKLGVTAKLENVEFKVLMKQRHDGKVQIARDGWFADYNDAMTFFDLI
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Known secondary structure (DSSP) S



TT

S
SSSSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RCGSSQNTVGYCNPKVDSLVAEANQKLDDGARAALLTQAHDLAMNDYPMVPLFQYSADRLVKSYVGGYTL
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Known secondary structure (DSSP) STT
TT

S



TT
SSTT
SS

B
TT


S
 .........500......
Sequence TNYIDMRASQDMYLIK
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Known secondary structure (DSSP)

TT



GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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