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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zqjC_

Fold library idPDB HeaderMoleculeTitle
c3zqjC_PDB header: dna binding proteinChain: C: PDB Molecule: uvrabc system protein a;PDBTitle: mycobacterium tuberculosis uvra


Added to library: Wed Jan 9 19:23:20 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDK
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Known secondary structure (DSSP)


STT

STTS
STTSSTTTTTS
TTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCPTCGERVARQTPQQIVDQVL
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Known secondary structure (DSSP)
S
SS



S





TT
BTSSB
B
SSS

B




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMPVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDGVVHPLTDPPKLKKQEKHDIEVVKRRLTDSVETALN
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Known secondary structure (DSSP)



S

TTTT



BTTS
B

TTS




TTS


STTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LADGIVVLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVVPAVAPWSNGHTAEYFTR
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Known secondary structure (DSSP) TTS





TT



S
S


TTTT
SSSTTTB
TTTTT



TTS




GGGSSSTTTTTGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence MMAGLGEALGKARKAILEGADEQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMR
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Known secondary structure (DSSP)



STT


SS





B

TTS

B








GGGGGGTTSSSS
STTTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DVPCPVCAGTRLKPEILAVTLAGHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRLGF
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Known secondary structure (DSSP)
TTTTTSSB

B



SS
TTTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence LLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGN
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Known secondary structure (DSSP) TT
TTS
TT
BGGG




S

TTTT

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDP
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Known secondary structure (DSSP)


T
S
SSSSGGG

S



SS
TSS




SS




S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLD
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Known secondary structure (DSSP) SS
STT

SSSSSTTSSTTTTT






S
S

T
 .........640.........650.........660.........670.........680.........690.........700
Sequence YLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIK
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Known secondary structure (DSSP) T
S


S
S
SSTT

TSSTTT

GGGS
TTSTTTB
TTTTTSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence IEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGY
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Known secondary structure (DSSP)

SSS


TTTTT
SB
T

BTTB
TSBSS
TTGGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence VRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEH
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Known secondary structure (DSSP) SBTT

GGGS
SS


S

STTTT

TT


 .........850.........860.........870.........880.........890
Sequence NLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEVV
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Known secondary structure (DSSP)

SSSSTTS
S

TT
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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