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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zokB_

Fold library idPDB HeaderMoleculeTitle
c3zokB_PDB header: lyaseChain: B: PDB Molecule: 3-dehydroquinate synthase;PDBTitle: structure of 3-dehydroquinate synthase from actinidia2 chinensis in complex with nad


Added to library: Sat Aug 24 08:36:18 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTIVDVDLGDRSYPIYIGSGLLDQPDLLQRHVHGKRVLVVTNSTVAPIYLDKVVGALTNENPNVSVESVI
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Known secondary structure (DSSP)


GGG
SSGGG
T

SSTTTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPDGEKYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSS
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Known secondary structure (DSSP)

SGGG
STT

TT
SGGG


STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVVKYGLIRDANFFEWQEKNMPALM
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Known secondary structure (DSSP) SS
TT


S
GGGGGSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDM
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Known secondary structure (DSSP) TT

TT
SSGGGGGGTT
BTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence SYRLGWIDESIVNRAHNILQQAKLPTAPPETMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDY
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Known secondary structure (DSSP) TT
S
TT

SS

TT

TT
TTTT

SSTT
S
S
 .........360......
Sequence DRKALDETLHAFCKSG
Predicted secondary structure


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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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