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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zleI_

Fold library idPDB HeaderMoleculeTitle
c3zleI_PDB header: membrane proteinChain: I: PDB Molecule: apical membrane antigen 1;PDBTitle: crystal structure of toxoplasma gondii sporozoite ama1


Added to library: Sat Aug 31 08:26:03 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GQNPWATTTAFADFMKRFNIPQVHGSGIFVDLGRDTEGYREVGGKCPVFGKAIQMHQPAEYSNNFLDDAP
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Known secondary structure (DSSP)


STT
T
S
SSS


TT


SS
T


TTS


TTSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence TSNDASKKPLPGGFNNPQVYTSGQKFSPIDDSLLQERLGTAGPKTAIGRCALYAYSTIAVNPSTNYTSTY
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Known secondary structure (DSSP) SS

TTSSS



SB


B
TTS
BSSS
TT

SST


TTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence KYPFVYDAVSRKCYVLSVSAQLLKGEKYCSVNGTPSGLTWACFEPVKEKSSARALVYGSAFVAEGNPDAW
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Known secondary structure (DSSP)


TTTTBS




B

TTT
BBTTBSTT
SSB



SS


GGGGSS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSACPNDAVKDALFGKWEDGQCVPFDTKTSVQSDQATNKEECWKRVFANPLVASDAPTTKNWNDFWPVHE
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Known secondary structure (DSSP) S


SSS

TTTSSB

B
SSSTTS








TT

S
B

 .........290.........300.........310.........320.........330.........340.........350
Sequence QSSPKSGGFGANWANFYLEESGETICAIFDQVPDCFAPITGAVAYTALGSSTEVNLPQCDSASFIPIEGP
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Known secondary structure (DSSP) SS



TT
SS






S


SSS





TTT




 .........360.........370.....
Sequence CNNCVQVVTECVGNQFDQTSKACCT
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Known secondary structure (DSSP)
BTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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