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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zifM_

Fold library idPDB HeaderMoleculeTitle
c3zifM_PDB header: virusChain: M: PDB Molecule: penton protein;PDBTitle: cryo-em structures of two intermediates provide insight2 into adenovirus assembly and disassembly


Added to library: Sat Jan 25 08:16:03 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEIHVPPRYAAASAGRNSIRYSMLPPLYDTTKIYLIDNKSSDIQTLNYQNDHSDYLTTIVQNSDFTPLEA
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Known secondary structure (DSSP)











SSSSS

SSS

B
SS


STTTTTTTTSSSS

SS



SSS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SNHSIELDERSRWGGNLKTILYTNLPNITQHMFSNSFRVKMMASKKDGVPQYEWFPLRLPEGNFSETMVI
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Known secondary structure (DSSP) SS


SSB






SS
TTTT
STT

SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence DLMNNAIVELYLALGRQEGVKEEDIGVKIDTRNFSLGYDPQTQLVTPGVYTNEAMHADIVLLPGCAIDFT
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Known secondary structure (DSSP) TTTS

SSS


B


B
TTSSB
TTT
SBTTSS



B




BB
TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence HSRLNNLLGIRKRFPYQEGFVISYEDLKGGNIPALMDVEEFNKSKTVRALREDPKGRSYHVGEDPEAREN
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Known secondary structure (DSSP) T
STS
TTSS


GGG

S

BB
GGG
SSS
TT
B



TT




BS
S
STTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ETAYRSWYLAYNYGDPEKGVRATTLLTTGDVTCGVEQIYWSLPDMALDPVTFKASLKTSNYPVVGTELLP
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Known secondary structure (DSSP)
TS
TTTSGGGT



TT




TTTB


TT





TTS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LVPRSFYNAQAVYSQWIQEKTNQTHVFNRFPENQILVRPPAPTITSISENKPSLTDHGIVPLRNRLGGVQ
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Known secondary structure (DSSP)


TTTTTTSSS
SS
S
SS
SSSS




SS






B
S
S
 .........430.........440.........450
Sequence RVTLTDARRRSCPYVYKSLGIVTPQVLSSR
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Known secondary structure (DSSP)
TTSS

TT





B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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