Fold library entry viewer: c3zifD_

Added to library: Sat Jan 25 08:14:42 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	P	Q	W	S	Y	M	H	I	A	G	Q	D	A	S	E	Y	L	S	P	G	L	V	Q	F	A	Q	A	T	E	S	Y	F	N	I	G	N	K	F	R	N	P	T	V	A	P	T	H	D	V	T	T	E	R	S	Q	R	L	Q	L	R	F	V	P	V	D	R	E	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	S	S	S						S											T	S	S	S	S			S	T	T	S									S	S	S	B		S	S				S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	Y	S	Y	K	T	R	F	Q	L	A	V	G	D	N	R	V	L	D	M	A	S	T	Y	F	D	I	R	G	T	L	D	R	G	A	S	F	K	P	Y	S	G	T	A	Y	N	S	F	A	P	K	S	A	P	N	N	T	Q	F	R	Q	A	N	N	G	H	P	A	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												T	T																				T	T		B		S	S	S		S	S	S	T	T	S		S	S		B		S	B				S	S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	Q	A	S	Y	V	A	T	I	G	G	A	N	N	D	L	Q	M	G	V	D	E	R	Q	L	P	V	Y	A	N	T	T	Y	Q	P	E	P	Q	L	G	I	E	G	W	T	A	G	S	M	A	V	I	D	Q	A	G	G	R	V	L	R	N	P	T	Q	T	P	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						S			S		B		S	S		B	B				S	S	S	S	S			B			T	T	T		S		T	T				S		S									S	S								S					B	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	S	Y	A	K	P	T	N	E	H	G	G	I	T	K	A	N	T	Q	V	E	K	K	Y	Y	R	T	G	D	N	G	N	P	E	T	V	F	Y	T	E	E	A	D	V	L	T	P	D	T	H	L	V	H	A	V	P	A	A	D	R	A	K	V	E	G	L	S	Q	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		B					S	T	T						S												S	S			S		S											B		S	S									S	S	S	T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	P	N	R	P	N	F	I	G	F	R	D	C	F	V	G	L	M	Y	Y	N	S	G	G	N	L	G	V	L	A	G	Q	S	S	Q	L	N	A	V	V	D	L	Q	D	R	N	T	E	L	S	Y	Q	M	L	L	A	N	T	T	D	R	S	R	Y	F	S	M	W	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B						G	G	G	T	T	S	S			S		G	G	G							T	T	T									T	T	S														S		T	T	S		B	G	G	G	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	M	D	S	Y	D	P	E	V	R	V	I	D	N	V	G	V	E	D	E	M	P	N	Y	C	F	P	L	S	G	V	Q	I	G	N	R	S	H	E	V	Q	R	N	Q	Q	Q	W	Q	N	V	A	N	S	D	N	N	Y	I	G	K	G	N	L	P	A	M	E	I	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S										S							T	T	S	S										B		S	S	S	S		B				S	S							S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	N	L	W	R	S	F	L	Y	S	N	V	A	L	Y	L	P	D	N	L	K	F	T	P	H	N	I	Q	L	P	P	N	T	N	T	Y	E	Y	M	N	G	R	I	P	V	S	G	L	I	D	T	Y	V	N	I	G	T	R	W	S	P	D	V	M	D	N	V	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	T	S		G	G	G					S	S					S		T	T	S											G	G	G	G		T	T	T	T	T	T						T	T	T	T	T	S		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	N	H	H	R	N	S	G	L	R	Y	R	S	Q	L	L	G	N	G	R	F	C	D	F	H	I	Q	V	P	Q	K	F	F	A	I	R	N	L	L	L	L	P	G	T	Y	T	Y	E	W	S	F	R	K	D	V	N	M	I	L	Q	S	T	L	G	N	D	L	R	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	T	T										T	T		S	S	S																	S					S																				S	S				T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	A	T	V	N	I	T	S	V	N	L	Y	A	S	F	F	P	M	S	H	N	T	A	S	T	L	E	A	M	L	R	N	D	T	N	D	Q	S	F	N	D	Y	L	S	A	A	N	M	L	Y	P	I	P	P	N	A	T	Q	L	P	I	P	S	R	N	W	A	A	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	B													T	S	G	G	G							S	S											T	T											S	S			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	W	S	L	T	R	L	K	Q	R	E	T	P	A	L	G	S	P	F	D	P	Y	F	T	Y	S	G	T	I	P	Y	L	D	G	T	F	Y	L	S	H	T	F	R	K	V	A	I	Q	F	D	S	S	V	T	W	P	G	N	D	R	L	L	T	P	N	E	F	E	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	S				S	S	S			T	T					S			T	T	T	T						G	G	G									T	T	T				S		T	T		S	S	S	T	T				S	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	S	V	D	G	E	G	Y	N	V	A	Q	S	N	M	T	K	D	W	F	L	V	Q	M	L	A	N	Y	N	I	G	Y	Q	G	Y	H	L	P	P	D	Y	K	D	R	T	F	S	F	L	H	N	F	I	P	M	C	R	Q	V	P	N	P	A	T	E	G	Y	F	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	T				T	T	T	T																	S	T	T							G	G	G			T	T		S	T	T	T											T	T	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	I	V	N	H	R	T	T	P	A	Y	W	F	R	F	C	R	A	P	R	E	G	H	P	Y	P	Q	L	A	L	P	P	H	W	D	P	R	H	A	L	R	D	P	E	R	K	F	L	C	D	R	T	L	W	R	I	P	F	S	S	N	F	M	S	M	G	S	L	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T			S	S	T	T	T	S		T	T	S	S	S	S			S							S	S			S	S	S	T	T														S							S	S	S	S	S			S		S	S		S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Sequence	L	G	Q	N	L	L	Y	A	N	A	A	H	A	L	D	M	T	F	E	M	D	P	I	N	E	P	T	L	L	Y	V	L	F	E	V	F	D	V	A	R	V	H	Q	P	H	R	G	V	I	E	V	V	Y	L	R	T	P	F	S	A	G	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G						S	S														S	S																				S	T	T										S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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