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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3zfsB_ | PDB header: oxidoreductase | Chain: B: PDB Molecule: f420-reducing hydrogenase, subunit gamma; | PDBTitle: cryo-em structure of the f420-reducing nife-hydrogenase2 from a methanogenic archaeon with bound substrate |
Added to library: Sat Mar 9 08:26:02 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | K | P | R | I | G | Y | I | H | L | S | G | C | T | G | D | A | M | S | L | T | E | N | Y | D | I | L | A | E | L | L | T | N | M | V | D | I | V | Y | G | Q | T | L | V | D | L | W | E | M | P | E | M | D | L | A | L | V | E | G | S | V | C | L | Q | D | E | H | S | L | H | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | S | S | S | S | S | S | S | S | S | B | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | L | K | E | L | R | E | K | A | K | L | V | C | A | F | G | S | C | A | A | T | G | C | F | T | R | Y | S | R | G | G | Q | Q | A | Q | P | S | H | E | S | F | V | P | I | A | D | L | I | D | V | D | L | A | L | P | G | C | P | P | S | P | E | I | I | A | K | T | V | V | A | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | B | ![]() | ![]() | ![]() | ![]() | T | T | S | S | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | N | A | G | Y | T | E | A | C | G | C | D | L | Q | T | K | V | V | N | Q | G | L | C | I | G | C | G | T | C | A | M | A | C | Q | T | R | A | L | D | M | T | N | G | R | P | E | L | N | S | D | R | C | I | K | C | G | I | C | Y | V | Q | C | P | R | S | W | W | P | E | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | S | S | T | T | T | T | T | S | S | T | T | S | T | T | S | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | |||||||||||||||||||||||||||||||||||
Sequence | Q | I | K | K | E | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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