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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zfsA_

Fold library idPDB HeaderMoleculeTitle
c3zfsA_PDB header: oxidoreductaseChain: A: PDB Molecule: f420-reducing hydrogenase, subunit alpha;PDBTitle: cryo-em structure of the f420-reducing nife-hydrogenase2 from a methanogenic archaeon with bound substrate


Added to library: Sat Mar 9 08:28:06 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SERIVISPTSRQEGHAELVMEVDDEGIVTKGRYFSITPVRGLEKMVTGKAPETAPVMVQRICGVCPIPHT
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Known secondary structure (DSSP)
SS
TT
SS


SSS


S



TTTS
TT
STTTGGGG
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LASVEAIDDSLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDFVPENLMADAINSVSEIRKNAQYVV
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Known secondary structure (DSSP) T




TTT

SSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DMVAGEGIHPSDVRIGGMADNITELARKRLYARLKQLKPKVNEHVELMIGLIEDKGLPEGLGVHNQPTLA
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Known secondary structure (DSSP) TSSSSSSS
SSTTS



STTTTTTTTTTTTSS
S

TTS


S


 .........220.........230.........240.........250.........260.........270.........280
Sequence SHQIYGDRTKFDLDRFTEIMPESWYDDPEIAKRACSTIPLYDGRNVEVGPRARMVEFQGFKERGVVAQHV
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Known secondary structure (DSSP)
S
SS

STTSTTSS
SSSSSSSS
SS
TTB



STTS





TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ARALEMKTALSRAIEILDELDTSAPVRADFDERGTGKLGIGAIEAPRGLDVHMAKVENGKIQFYSALVPT
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Known secondary structure (DSSP) TT






















SSS
SSSS
TT
 .........360.........370.........380.....
Sequence TWNIPTMGPATEGFHHEYGPHVIRAYDPCLSCATH
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Known secondary structure (DSSP) TTTGGGTGGGSTTS
TTS


S


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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