PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3zf7K_

Fold library id	PDB Header	Molecule	Title
c3zf7K_	PDB header: ribosome	Chain: K: PDB Molecule: 60s ribosomal protein l10, putative;	PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome

Links to external resources
Added to library: Sat Feb 16 08:32:21 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R R P A R C Y R F C K N K P Y P K S R F C R G V P D P R I R T F D I G K R R A P V D E F P V C V H V V S R E L E Q I S S E A L E A A R I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G G
S
S S
S
T T
G G G
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A N K Y M V K R A N K E C F H M R I R A H P F H V L R I N K M L S C A G A D R L Q T G M R Q S Y G K P N G T C A R V R I G Q I L L S M R T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S S S S S
S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D T Y V P Q A L E S L R R A K M K F P G R Q I I V I S K Y W G F T N I L R N E Y E E L R D A G K L Q Q R G L H V K L I T P K G K I T P Y N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T S
S
T T S
S B T
S S S
S S
S
S

. .

Sequence M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	R	P	A	R	C	Y	R	F	C	K	N	K	P	Y	P	K	S	R	F	C	R	G	V	P	D	P	R	I	R	T	F	D	I	G	K	R	R	A	P	V	D	E	F	P	V	C	V	H	V	V	S	R	E	L	E	Q	I	S	S	E	A	L	E	A	A	R	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G	G					S							S	S								S									T	T			G	G	G											S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	N	K	Y	M	V	K	R	A	N	K	E	C	F	H	M	R	I	R	A	H	P	F	H	V	L	R	I	N	K	M	L	S	C	A	G	A	D	R	L	Q	T	G	M	R	Q	S	Y	G	K	P	N	G	T	C	A	R	V	R	I	G	Q	I	L	L	S	M	R	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S																					S	S	S	S	S	S	S			S		S	S														S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	T	Y	V	P	Q	A	L	E	S	L	R	R	A	K	M	K	F	P	G	R	Q	I	I	V	I	S	K	Y	W	G	F	T	N	I	L	R	N	E	Y	E	E	L	R	D	A	G	K	L	Q	Q	R	G	L	H	V	K	L	I	T	P	K	G	K	I	T	P	Y	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G													T	T	S		S											T	T	S		S	B											T						S	S	S						S	S			S					S
	.	.
Sequence	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)