PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3zf7I_

Fold library id	PDB Header	Molecule	Title
c3zf7I_	PDB header: ribosome	Chain: I: PDB Molecule: 60s ribosomal protein l18;	PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome

Links to external resources
Added to library: Sat Feb 16 08:40:14 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G V D L T G V Q K K K R V V R H H T Y S T N P Y I K L L I K L Y K F L G K R T N S P F N K L I H K R L L K S R N N R A P I S L S R I A V C M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T
S S
T T
S G G G
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R R R T V W L K K G K K S P I A V I V G D V L D D V R M T R I P A L R I C A L R F S K S A R E R I T G A G G E C L T F D Q L A M M A P T G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S S S S
S
S S
T T
T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . .

Sequence N T M L L R G R K S G R E S V K H F G A A G V P G S H A K P H V S S R G K E R Q R S S K R R H A F R H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S G G G G S
S
T T T
S
S
S S S S T T
S S S S S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	V	D	L	T	G	V	Q	K	K	K	R	V	V	R	H	H	T	Y	S	T	N	P	Y	I	K	L	L	I	K	L	Y	K	F	L	G	K	R	T	N	S	P	F	N	K	L	I	H	K	R	L	L	K	S	R	N	N	R	A	P	I	S	L	S	R	I	A	V	C	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S				T	T		S	S																						T	T															S	G	G	G					S					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	R	R	T	V	W	L	K	K	G	K	K	S	P	I	A	V	I	V	G	D	V	L	D	D	V	R	M	T	R	I	P	A	L	R	I	C	A	L	R	F	S	K	S	A	R	E	R	I	T	G	A	G	G	E	C	L	T	F	D	Q	L	A	M	M	A	P	T	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S		S	S	S	S																S		S	S																						T	T											T	T			S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Sequence	N	T	M	L	L	R	G	R	K	S	G	R	E	S	V	K	H	F	G	A	A	G	V	P	G	S	H	A	K	P	H	V	S	S	R	G	K	E	R	Q	R	S	S	K	R	R	H	A	F	R	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T		S	G	G	G	G	S			S			T	T	T					S		S		S	S	S	S	T	T			S	S	S	S	S	T	T	T	T