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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zey1_

Fold library idPDB HeaderMoleculeTitle
c3zey1_PDB header: ribosomeChain: 1: PDB Molecule: 40s ribosomal protein s4, putative;PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome


Added to library: Sat Feb 16 08:35:07 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMILRQGLVCVDGKPRKDGK
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Known secondary structure (DSSP)



GGG


SS

SS
S


SSSS
GGG
TS
S

ST



BSSS

S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNVYTGTGRIPVAVTHDGHRIRYPD
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Known secondary structure (DSSP) S
TT
TTTTTTT

TTGGG
TTTTTS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDASGHEFATR
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Known secondary structure (DSSP) TT

TT

SSSS




SS

SSTTTT

TTT


TTS
 .........220.........230.........240.......
Sequence ATNIFVIGKDMSSVPVTLPKQQGLRINVIQEREEKLI
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Known secondary structure (DSSP) GGGSSS
SS
S


TT
S



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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