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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3zdkA_

Fold library idPDB HeaderMoleculeTitle
c3zdkA_PDB header: hydrolaseChain: A: PDB Molecule: 5' exonuclease apollo;PDBTitle: crystal structure of human 5' exonuclease apollo


Added to library: Tue Jan 22 09:07:27 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMNGVLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQVSKQWI
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Known secondary structure (DSSP)




TTSSS



SS





GGGSTT
STT

S




TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQI
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Known secondary structure (DSSP)

TTSSSSSSS

SSSTT
TT

S



GGGGG
GGGSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence HTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLE
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Known secondary structure (DSSP) S

TB

TT




T
TTS
SSS
T



 .........220.........230.........240.........250.........260.........270.........280
Sequence LVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHVIPYSDHSSY
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Known secondary structure (DSSP) TT

S
S
GGG
SGGG
SS

SS



SSTT


SS
B
 .........290.........300.........310....
Sequence SELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPR
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Known secondary structure (DSSP)

S
S
TTS


S
GGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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