Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wyaA_

Fold library idPDB HeaderMoleculeTitle
c3wyaA_PDB header: translationChain: A: PDB Molecule: elongation factor 1-alpha;PDBTitle: crystal structure of gdp-bound ef1alpha from pyrococcus horikoshii


Added to library: Sat Dec 27 08:54:23 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPKFAWVMDRLKEEHTKFETPHRYITIIDAPGHRDFVKNMI
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)


STTSSTT







SS

TTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TSS

STTT
S
TT


GGGGTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGR
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S



TTT
TTTSS

SS
TT

S

TT





GGGS

BTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTD
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

BS
TT
TTS

TTS
TT
TT

GGG

TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGD
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S



TT



SS
B
TT


TT
TTT

S
S
B
TT
 .........360.........370.........380.........390......
Sequence SAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQKG
Predicted secondary structure















SS confidence













































Known secondary structure (DSSP) SS



TTT
GGGTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D