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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wxeA_

Fold library idPDB HeaderMoleculeTitle
c3wxeA_PDB header: hydrolase/protein bindingChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of cyld usp domain (c596s) in complex with met1-2 linked diubiquitin


Added to library: Sat Feb 14 08:21:37 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGLEVMVGKKKGIQGHYNSSYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIH
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Known secondary structure (DSSP)

STTS
S



SS
SS

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TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYVCATKIMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMDK
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Known secondary structure (DSSP) S
STTS
TTTS


TTS



STTS

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 .........150.........160.........170.........180.........190.........200.........210
Sequence KDKVMVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDQQMELFAV
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Known secondary structure (DSSP) TTS
SS
BTTSS

S

B
STT
BS
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B

S
GGGB


 .........220.........230.........240.........250.........260.........270.........280
Sequence LCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQVSRCPEVGEYLKMTPEELHALDPKNIQGY
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Known secondary structure (DSSP) SSS

SSSTT
SSSS

TTTS
TS
GGGS
TT
 .........290.........300.
Sequence ARRLLCDAYMCMYQSPTMSLY
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Known secondary structure (DSSP) S
S
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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